Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   BFO62_RS10365 Genome accession   NZ_CP017257
Coordinates   1804342..1804986 (-) Length   214 a.a.
NCBI ID   WP_002255749.1    Uniprot ID   -
Organism   Neisseria meningitidis strain COL-201504-11     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1799342..1809986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFO62_RS10325 (BFO62_09320) ftsL 1799712..1799975 (-) 264 WP_002232818.1 cell division protein FtsL -
  BFO62_RS10330 (BFO62_09325) rsmH 1799972..1800958 (-) 987 WP_002238769.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  BFO62_RS10335 (BFO62_09330) mraZ 1800955..1801410 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  BFO62_RS10340 (BFO62_09335) - 1801689..1802906 (+) 1218 WP_076612585.1 class I SAM-dependent methyltransferase -
  BFO62_RS10360 (BFO62_09350) - 1803488..1804309 (-) 822 WP_076612584.1 undecaprenyl-diphosphate phosphatase -
  BFO62_RS10365 (BFO62_09355) dsbA1 1804342..1804986 (-) 645 WP_002255749.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BFO62_RS10370 (BFO62_09360) ftsN 1804989..1805834 (-) 846 WP_002218775.1 cell division protein FtsN -
  BFO62_RS10375 (BFO62_09365) comM 1805940..1807436 (-) 1497 WP_002245890.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  BFO62_RS10380 (BFO62_09370) - 1807450..1807770 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  BFO62_RS10390 (BFO62_09380) putP 1808253..1809779 (+) 1527 WP_002220352.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23939.93 Da        Isoelectric Point: 9.7103

>NTDB_id=197013 BFO62_RS10365 WP_002255749.1 1804342..1804986(-) (dsbA1) [Neisseria meningitidis strain COL-201504-11]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKQFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=197013 BFO62_RS10365 WP_002255749.1 1804342..1804986(-) (dsbA1) [Neisseria meningitidis strain COL-201504-11]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCCC
AAAAGCAGTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.219

87.383

0.5
  dsbA2 Neisseria meningitidis MC58

51.613

86.916

0.449

Multiple sequence alignment