Detailed information NTG0196867

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BL1202_RS09680
• Genome accession: NZ_CP017247
• Coordinates: 1879539..1880318 (+)
• Length: 259 a.a.
• NCBI ID: WP_003181756.1
• Uniprot ID: A0A1Y0YKK2
• Organism: Bacillus licheniformis strain BL1202
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1874539..1885318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL1202_RS09660 (BL1202_01985)	trmFO	1875236..1876540 (+)	1305	WP_003181748.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BL1202_RS09665 (BL1202_01986)	xerC	1876607..1877521 (+)	915	WP_011197974.1	tyrosine recombinase XerC	-
BL1202_RS09670 (BL1202_01987)	hslV	1877535..1878080 (+)	546	WP_003181752.1	ATP-dependent protease subunit HslV	-
BL1202_RS09675 (BL1202_01988)	hslU	1878097..1879500 (+)	1404	WP_003181754.1	HslU--HslV peptidase ATPase subunit	-
BL1202_RS09680 (BL1202_01989)	codY	1879539..1880318 (+)	780	WP_003181756.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BL1202_RS09685 (BL1202_01991)	flgB	1880672..1881061 (+)	390	WP_003181758.1	flagellar basal body rod protein FlgB	-
BL1202_RS09690 (BL1202_01992)	flgC	1881061..1881513 (+)	453	WP_009328519.1	flagellar basal body rod protein FlgC	-
BL1202_RS09695 (BL1202_01993)	fliE	1881527..1881844 (+)	318	WP_003181764.1	flagellar hook-basal body complex protein FliE	-
BL1202_RS09700 (BL1202_01994)	fliF	1881895..1883496 (+)	1602	WP_003181766.1	flagellar basal-body MS-ring/collar protein FliF	-
BL1202_RS09705 (BL1202_01995)	fliG	1883510..1884526 (+)	1017	WP_003181768.1	flagellar motor switch protein FliG	-
BL1202_RS09710 (BL1202_01996)	fliH	1884510..1885277 (+)	768	WP_009328518.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29073.42 Da
• Isoelectric Point: 4.8196

>NTDB_id=196867 BL1202_RS09680 WP_003181756.1 1879539..1880318(+) (codY) [Bacillus licheniformis strain BL1202]
MALLQKTRKINAMLQNAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGFSINQQIENDRMKKMLEERQFPEDYTKSLF
NIPETSSNLDINSEYTAFPVENRDLFQAGLTTVVPIIGGGERLGTLILSRLQEKFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLMELEKLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=196867 BL1202_RS09680 WP_003181756.1 1879539..1880318(+) (codY) [Bacillus licheniformis strain BL1202]
ATGGCTTTATTACAAAAAACAAGAAAGATTAATGCAATGCTGCAAAATGCGGCAGGGAAGCCGGTTAATTTTAAAGAAAT
GGCCGAAACGCTTCGCGATGTGATTGATTCGAACATTTTCGTCGTCAGCCGCAGAGGAAAGCTTCTCGGTTTCTCGATCA
ACCAGCAGATCGAAAATGACCGGATGAAAAAAATGCTTGAAGAGCGCCAGTTTCCTGAAGATTATACAAAAAGCCTGTTC
AACATTCCGGAAACGTCATCTAACCTTGACATCAACAGCGAATACACAGCTTTCCCTGTGGAAAACCGCGATTTGTTCCA
AGCGGGTCTGACCACGGTCGTTCCGATCATCGGAGGAGGCGAAAGACTGGGCACCTTGATTCTGTCCCGCCTTCAGGAGA
AATTCGAGGATGACGATCTGATCCTTGCCGAATATGGCGCCACTGTCGTAGGAATGGAAATTCTCAGAGAGAAAGCGGAA
GAGATCGAAGAGGAAGCGCGCAGCAAAGCGGTCGTTCAAATGGCGATCAGTTCACTATCTTACAGCGAGCTTGAAGCAAT
TGAACATATTTTTGAGGAGCTTGACGGAAATGAAGGCCTGCTTGTCGCTAGTAAAATTGCAGACCGCGTCGGCATCACCC
GCTCGGTCATTGTCAACGCGCTCCGTAAACTTGAAAGCGCCGGTGTCATTGAATCAAGGTCACTAGGGATGAAAGGCACA
TACATCAAAGTGCTGAACAACAAATTTTTGATGGAGTTAGAAAAACTAAAGTCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: A0A1Y0YKK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	94.595	100	0.946
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467