Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | A7J08_RS08455 | Genome accession | NZ_CP017088 |
| Coordinates | 1691845..1692339 (-) | Length | 164 a.a. |
| NCBI ID | WP_002942409.1 | Uniprot ID | A0A075SLH4 |
| Organism | Streptococcus suis strain SRD478 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1686845..1697339
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7J08_RS08440 (A7J08_08225) | - | 1689439..1690383 (+) | 945 | WP_002939248.1 | magnesium transporter CorA family protein | - |
| A7J08_RS08445 (A7J08_08230) | - | 1690399..1691055 (+) | 657 | WP_012027735.1 | DUF1129 domain-containing protein | - |
| A7J08_RS08450 (A7J08_08235) | rpsR | 1691573..1691812 (-) | 240 | WP_002939250.1 | 30S ribosomal protein S18 | - |
| A7J08_RS08455 (A7J08_08240) | ssbA | 1691845..1692339 (-) | 495 | WP_002942409.1 | single-stranded DNA-binding protein | Machinery gene |
| A7J08_RS08460 (A7J08_08245) | rpsF | 1692351..1692641 (-) | 291 | WP_002942403.1 | 30S ribosomal protein S6 | - |
| A7J08_RS08465 (A7J08_08250) | - | 1692812..1693801 (-) | 990 | WP_148115839.1 | lipoate--protein ligase | - |
| A7J08_RS08470 (A7J08_08255) | lpdA | 1693902..1695662 (-) | 1761 | WP_053866900.1 | dihydrolipoyl dehydrogenase | - |
| A7J08_RS08475 (A7J08_08260) | - | 1695860..1697248 (-) | 1389 | WP_053866902.1 | dihydrolipoamide acetyltransferase | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18102.87 Da Isoelectric Point: 4.7294
>NTDB_id=195414 A7J08_RS08455 WP_002942409.1 1691845..1692339(-) (ssbA) [Streptococcus suis strain SRD478]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
DLPF
Nucleotide
Download Length: 495 bp
>NTDB_id=195414 A7J08_RS08455 WP_002942409.1 1691845..1692339(-) (ssbA) [Streptococcus suis strain SRD478]
ATGATTAATAATGTAGTATTGGTTGGTCGTATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAATCAAGCTGTTGC
GACTTTTACTTTGGCGGTTAACCGCAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTCATTT
GGCGTCAACAAGCTGAGAATTTGGCGAATTGGGCTAAGAAAGGTGCTCTGATTGGTGTTACAGGTCGTATCCAGACTCGT
AGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAAGTTTCCAACTCTTGGAAAGCCGTAC
TGCCCGTGAAGGTCAAGGTGGAGGCTATTCAGCTGGTAACTCGTTTGCTGGAGGAAATGACTACAACTCACCTTATCAAG
CACCTGCACAATCTACACCAAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGCAATCCAATGGACATATCAGACGAT
GACCTACCATTCTAG
ATGATTAATAATGTAGTATTGGTTGGTCGTATGACCCGTGATGCAGAACTTCGTTATACTCCGTCTAATCAAGCTGTTGC
GACTTTTACTTTGGCGGTTAACCGCAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTCATTT
GGCGTCAACAAGCTGAGAATTTGGCGAATTGGGCTAAGAAAGGTGCTCTGATTGGTGTTACAGGTCGTATCCAGACTCGT
AGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAAGTTTCCAACTCTTGGAAAGCCGTAC
TGCCCGTGAAGGTCAAGGTGGAGGCTATTCAGCTGGTAACTCGTTTGCTGGAGGAAATGACTACAACTCACCTTATCAAG
CACCTGCACAATCTACACCAAACTTCGCTCGAGAAGAAAGTCCATTTGGAGCAAGCAATCCAATGGACATATCAGACGAT
GACCTACCATTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.604 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.322 |
100 |
0.598 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.463 |
0.366 |