Detailed information NTG0195301

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ABE28_RS22480
• Genome accession: NZ_CP017080
• Coordinates: 4616018..4616980 (-)
• Length: 320 a.a.
• NCBI ID: WP_306807313.1
• Uniprot ID: -
• Organism: Peribacillus muralis strain G25-68
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4611018..4621980

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABE28_RS22450 (ABE28_022450)	flgL	4611278..4612156 (-)	879	WP_064467181.1	flagellar hook-associated protein FlgL	-
ABE28_RS22455 (ABE28_022455)	flgK	4612172..4613731 (-)	1560	WP_064467180.1	flagellar hook-associated protein FlgK	-
ABE28_RS22460 (ABE28_022460)	-	4613760..4614248 (-)	489	WP_064467179.1	flagellar protein FlgN	-
ABE28_RS22465 (ABE28_022465)	flgM	4614331..4614594 (-)	264	WP_064467178.1	flagellar biosynthesis anti-sigma factor FlgM	-
ABE28_RS22470 (ABE28_022470)	-	4614815..4615234 (-)	420	WP_306807312.1	TIGR03826 family flagellar region protein	-
ABE28_RS22475 (ABE28_022475)	-	4615333..4616025 (-)	693	WP_064467176.1	ComF family protein	-
ABE28_RS22480 (ABE28_022480)	comFA	4616018..4616980 (-)	963	WP_306807313.1	helicase-related protein	Machinery gene
ABE28_RS22485 (ABE28_022485)	-	4617532..4618374 (-)	843	WP_064467175.1	DegV family protein	-
ABE28_RS22490 (ABE28_022490)	-	4618540..4619223 (-)	684	WP_064467174.1	response regulator transcription factor	-
ABE28_RS22495 (ABE28_022495)	-	4619264..4620406 (-)	1143	WP_064467173.1	sensor histidine kinase	-
ABE28_RS22500 (ABE28_022500)	-	4621038..4621673 (+)	636	WP_064467172.1	YigZ family protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35657.49 Da
• Isoelectric Point: 10.6142

>NTDB_id=195301 ABE28_RS22480 WP_306807313.1 4616018..4616980(-) (comFA) [Peribacillus muralis strain G25-68]
MGGLRAGKTEVLFPAVETALLAGKRICLATPRTDVVLELSPRLKKAFPEIDVAALYGGSADRDSPSQLIISTTHQLFRFI
EAFDVIIVDEVDAFPYSADASLRHAVNKSKKASASTIYLTATPSKRMQRLHRSGKLKAVTIPARYHRQPIPVPEMKWCGN
WQKKFHGKKIPPVISRWVSDRLRQNTPFLLFFPSIQVLEQVVPLFHTLSPNLNIVHSQHPKRKERVMALRNGEVPGLLTT
TILERGVTIERLEVAVIGSEHEVFSESALVQIAGRVGRSSAHPHGTITFFHYGKSKAMSEAIHHIQMMNKAAREMGLLDA

Nucleotide

• Length: 963 bp

>NTDB_id=195301 ABE28_RS22480 WP_306807313.1 4616018..4616980(-) (comFA) [Peribacillus muralis strain G25-68]
ATGGGCGGTCTGCGTGCAGGCAAGACGGAGGTCTTATTTCCAGCCGTCGAGACAGCGCTGCTTGCCGGGAAACGAATCTG
CCTGGCAACACCGCGTACGGATGTCGTTCTCGAACTTTCACCAAGACTGAAAAAGGCTTTCCCCGAAATCGATGTCGCTG
CACTTTATGGAGGCAGTGCAGACCGGGATAGCCCCTCTCAGCTTATTATCTCCACGACTCATCAGCTTTTTCGTTTTATT
GAAGCCTTTGACGTGATCATCGTCGATGAGGTTGATGCGTTTCCCTACTCCGCGGATGCTTCCCTGCGTCATGCAGTCAA
TAAGTCGAAAAAAGCCTCTGCCTCAACCATCTACCTTACCGCCACCCCTTCGAAGCGTATGCAGCGATTGCACCGAAGCG
GCAAATTGAAAGCCGTGACCATCCCGGCCCGTTACCATCGTCAGCCAATTCCTGTCCCGGAAATGAAGTGGTGCGGGAAC
TGGCAGAAAAAATTTCATGGGAAAAAGATTCCCCCCGTTATTAGCAGGTGGGTAAGTGACCGGCTGAGGCAAAACACCCC
CTTCCTCTTGTTTTTTCCGAGCATTCAAGTGTTGGAGCAAGTCGTTCCACTGTTTCACACGCTGTCTCCTAACTTGAATA
TCGTCCACTCCCAGCATCCCAAGCGAAAAGAAAGAGTGATGGCGTTAAGGAATGGAGAGGTTCCAGGGCTATTGACCACG
ACCATTCTGGAACGCGGGGTGACGATTGAACGCTTGGAGGTTGCCGTGATCGGCTCGGAGCATGAAGTGTTTTCAGAAAG
CGCCCTCGTCCAAATTGCCGGAAGGGTGGGGAGAAGCTCGGCACATCCGCACGGCACGATCACTTTTTTTCATTATGGCA
AAAGTAAAGCGATGAGCGAGGCGATCCATCATATCCAAATGATGAATAAGGCTGCTCGGGAAATGGGATTGCTCGATGCG
TAG

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (184-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.318	98.125	0.494
comFA/cflA	Streptococcus mitis SK321	40.129	96.563	0.387
comFA/cflA	Streptococcus pneumoniae D39	39.806	96.563	0.384
comFA/cflA	Streptococcus pneumoniae R6	39.806	96.563	0.384
comFA/cflA	Streptococcus mitis NCTC 12261	39.806	96.563	0.384
comFA/cflA	Streptococcus pneumoniae TIGR4	39.806	96.563	0.384
comFA/cflA	Streptococcus pneumoniae Rx1	39.806	96.563	0.384
comFA	Lactococcus lactis subsp. cremoris KW2	37.785	95.938	0.362