Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BGM23_RS02885 Genome accession   NZ_CP017072
Coordinates   543316..543435 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus sp. FJAT-14266     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 538316..548435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS02855 (BGM23_02855) - 538972..539532 (-) 561 WP_029726083.1 hypothetical protein -
  BGM23_RS02860 (BGM23_02860) - 539525..540172 (-) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  BGM23_RS02865 (BGM23_02865) - 540175..540972 (-) 798 WP_231573542.1 hypothetical protein -
  BGM23_RS02870 (BGM23_02870) - 540982..541656 (-) 675 WP_015714894.1 hypothetical protein -
  BGM23_RS02875 (BGM23_02875) - 541643..542431 (-) 789 WP_015714893.1 membrane protein -
  BGM23_RS02880 (BGM23_02880) - 542580..543059 (-) 480 WP_015714892.1 hypothetical protein -
  BGM23_RS02885 (BGM23_02885) phrF 543316..543435 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BGM23_RS02890 (BGM23_02890) rapF 543419..544564 (-) 1146 WP_015714890.1 response regulator aspartate phosphatase RapF Regulator
  BGM23_RS02900 (BGM23_02900) - 544794..546149 (+) 1356 WP_046664001.1 YncE family protein -
  BGM23_RS02905 (BGM23_02905) - 546188..547561 (+) 1374 Protein_529 YncE family protein -
  BGM23_RS02910 (BGM23_02910) albG 547567..548268 (-) 702 WP_003227556.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=195156 BGM23_RS02885 WP_009968329.1 543316..543435(-) (phrF) [Bacillus sp. FJAT-14266]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=195156 BGM23_RS02885 WP_009968329.1 543316..543435(-) (phrF) [Bacillus sp. FJAT-14266]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment