Detailed information NTG0195157

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BGM23_RS02890
• Genome accession: NZ_CP017072
• Coordinates: 543419..544564 (-)
• Length: 381 a.a.
• NCBI ID: WP_015714890.1
• Uniprot ID: -
• Organism: Bacillus sp. FJAT-14266
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 538419..549564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BGM23_RS02855 (BGM23_02855)	-	538972..539532 (-)	561	WP_029726083.1	hypothetical protein	-
BGM23_RS02860 (BGM23_02860)	-	539525..540172 (-)	648	WP_015714896.1	ABC transporter ATP-binding protein	-
BGM23_RS02865 (BGM23_02865)	-	540175..540972 (-)	798	WP_231573542.1	hypothetical protein	-
BGM23_RS02870 (BGM23_02870)	-	540982..541656 (-)	675	WP_015714894.1	hypothetical protein	-
BGM23_RS02875 (BGM23_02875)	-	541643..542431 (-)	789	WP_015714893.1	membrane protein	-
BGM23_RS02880 (BGM23_02880)	-	542580..543059 (-)	480	WP_015714892.1	hypothetical protein	-
BGM23_RS02885 (BGM23_02885)	phrF	543316..543435 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
BGM23_RS02890 (BGM23_02890)	rapF	543419..544564 (-)	1146	WP_015714890.1	response regulator aspartate phosphatase RapF	Regulator
BGM23_RS02900 (BGM23_02900)	-	544794..546149 (+)	1356	WP_046664001.1	YncE family protein	-
BGM23_RS02905 (BGM23_02905)	-	546188..547561 (+)	1374	Protein_529	YncE family protein	-
BGM23_RS02910 (BGM23_02910)	albG	547567..548268 (-)	702	WP_003227556.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BGM23_RS02915 (BGM23_02915)	-	548265..549545 (-)	1281	WP_046664000.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45571.01 Da
• Isoelectric Point: 4.9848

>NTDB_id=195157 BGM23_RS02890 WP_015714890.1 543419..544564(-) (rapF) [Bacillus sp. FJAT-14266]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLNLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=195157 BGM23_RS02890 WP_015714890.1 543419..544564(-) (rapF) [Bacillus sp. FJAT-14266]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTAATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTAAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572