Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   BGL51_RS07930 Genome accession   NZ_CP017064
Coordinates   1494690..1495724 (-) Length   344 a.a.
NCBI ID   WP_024703983.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1489690..1500724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGL51_RS07905 (BGL51_07795) ilvD 1489942..1491660 (-) 1719 WP_011226435.1 dihydroxy-acid dehydratase -
  BGL51_RS07910 (BGL51_07800) - 1491773..1492954 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  BGL51_RS07920 (BGL51_07810) trmB 1493190..1493831 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BGL51_RS07925 (BGL51_07815) ccrZ 1493841..1494632 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  BGL51_RS07930 (BGL51_07820) pptB 1494690..1495724 (-) 1035 WP_024703983.1 ABC transporter permease Regulator
  BGL51_RS07935 (BGL51_07825) pptA 1495724..1496455 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  BGL51_RS07940 (BGL51_07830) - 1496520..1496939 (+) 420 WP_011681530.1 HIT family protein -
  BGL51_RS07945 (BGL51_07835) - 1496936..1497235 (+) 300 WP_011681531.1 hypothetical protein -
  BGL51_RS07950 (BGL51_07840) - 1497287..1497964 (-) 678 WP_011681532.1 hypothetical protein -
  BGL51_RS07955 (BGL51_07845) - 1498034..1498669 (-) 636 WP_011681533.1 DUF4230 domain-containing protein -
  BGL51_RS10775 - 1498688..1498813 (-) 126 WP_011681534.1 hypothetical protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40019.52 Da        Isoelectric Point: 10.5812

>NTDB_id=194991 BGL51_RS07930 WP_024703983.1 1494690..1495724(-) (pptB) [Streptococcus thermophilus strain ST3]
MAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLEP
ADKHYLLVKEEEVLDHIKKATGRAFRFWVLIQTLIFILVVPLFLALGLPVWGVVLIAVAMAILKYFIFQKKAQPFYKQSG
LNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGYLDGILKRTKKDKKYTWYNLYLRAFLRSGDYVALSLRLFALT
LLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVSNLKRLINQIVLVMTLIQALCLFDLKFS
LILIGVMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=194991 BGL51_RS07930 WP_024703983.1 1494690..1495724(-) (pptB) [Streptococcus thermophilus strain ST3]
ATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGACCA
CTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGAATC
CATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTTTTACTTCCTTTTTGGGGTAATATTGCCACCTATTTAGAGCCT
GCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGCGTGCTTTTAGATT
TTGGGTACTCATCCAGACCTTGATTTTTATCTTGGTCGTTCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGGGAGTTG
TCCTTATAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCTGGA
TTGAATTGGACTGATGCTATTGCAGCGGAGAATAAACGACAACAATCAATCTTGAAGTTTTTCTCACTCTTTACCAATGT
TAAGGGAATTACATCGAGTGTTAAACGCCGTGGCTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAATATA
CGTGGTACAACCTGTACCTAAGAGCCTTCTTACGTTCAGGAGATTACGTTGCCCTTAGCCTACGCCTTTTTGCTTTAACA
CTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTTCCA
GCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGGCCAACCTTATGCCAATTGGAAAAGACATGCAGGTGAGCA
ATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTTAGC
CTGATTTTGATTGGAGTTATGCTAGTTTTGAGTCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

100

100

1

  pptB Streptococcus salivarius strain HSISS4

92.733

100

0.927


Multiple sequence alignment