Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BFM96_RS07445 Genome accession   NZ_CP016953
Coordinates   1594127..1594930 (+) Length   267 a.a.
NCBI ID   WP_068992441.1    Uniprot ID   A0A917A6J5
Organism   Streptococcus himalayensis strain HTS2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1589127..1599930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS07425 guaC 1590421..1591404 (+) 984 WP_068992429.1 GMP reductase -
  BFM96_RS07430 - 1591520..1591924 (-) 405 WP_068992431.1 DUF6556 family protein -
  BFM96_RS07435 micA 1592080..1592781 (+) 702 WP_068992434.1 response regulator YycF Regulator
  BFM96_RS07440 micB 1592774..1594126 (+) 1353 WP_068992437.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BFM96_RS07445 vicX 1594127..1594930 (+) 804 WP_068992441.1 MBL fold metallo-hydrolase Regulator
  BFM96_RS11545 - 1595358..1595594 (+) 237 Protein_1436 IS630 family transposase -
  BFM96_RS07450 rpiA 1595828..1596511 (+) 684 WP_068992444.1 ribose-5-phosphate isomerase RpiA -
  BFM96_RS07455 - 1596514..1597725 (+) 1212 WP_068992446.1 phosphopentomutase -
  BFM96_RS07460 - 1597727..1598257 (+) 531 WP_068992449.1 ClbS/DfsB family four-helix bundle protein -
  BFM96_RS07465 - 1598267..1598827 (+) 561 WP_068992452.1 GTP pyrophosphokinase -
  BFM96_RS07470 - 1598845..1599654 (+) 810 WP_068992455.1 purine-nucleoside phosphorylase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29729.67 Da        Isoelectric Point: 6.0751

>NTDB_id=194053 BFM96_RS07445 WP_068992441.1 1594127..1594930(+) (vicX) [Streptococcus himalayensis strain HTS2]
MSSKGFKYSILASGSSGNCFYLETDQKKILVDAGLSGKKITSLLGEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANEETWQAMDTALGKIDVSQKHIFEMGKTKTFGDLDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDKGHLSNEDGAETMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVHQL
ARADLGVGVDFQVYDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=194053 BFM96_RS07445 WP_068992441.1 1594127..1594930(+) (vicX) [Streptococcus himalayensis strain HTS2]
ATGAGTAGTAAAGGATTTAAGTATAGTATTTTAGCTTCTGGCTCCAGTGGAAATTGCTTCTATCTGGAGACTGATCAGAA
GAAAATTTTAGTAGATGCAGGTCTCTCGGGCAAGAAAATCACCAGTCTCCTCGGAGAGATTGGGCGTAAGCCCGAGGATT
TGGATGCGATTTTGGTCACCCATGAGCATAAGGACCATATCCACGGGGTAGGAGTCTTGGCCCGCAAGTACCATCTGGAT
ATCTATGCCAATGAGGAGACTTGGCAAGCTATGGACACAGCTTTGGGCAAGATTGATGTCAGCCAAAAGCATATCTTTGA
AATGGGCAAGACCAAGACCTTTGGGGACTTGGATATCGAAAGTTTTGGGGTCAGCCATGACGCGGTAGCACCTCAGTTTT
ATCGCTTTATGAAGGATGATAAGAGCTTTGTTATGCTGACGGATACGGGCTATGTGAGTGACCGCATGGCGGGCATTATC
GAAAATGCCGATGGCTATCTAATCGAGTCCAATCACGATATCGAAATCCTGCGAAGTGGGGCCTATCCATGGAGCCTCAA
GCAGCGGATCCTCTCAGACAAAGGTCATCTATCCAATGAGGACGGGGCGGAGACCATGATTCGCACCTTGGGCAATCGCA
CTAAAAAAATCTATCTAGGCCACCTCAGTAAGGAAAATAATATCAAGGAGTTGGCTCACATGACCATGGTCCATCAGCTG
GCACGGGCAGATCTTGGGGTCGGTGTGGATTTTCAGGTCTATGATACCTCGCCAGACACGGCAACGCCTTTGACAGACAT
CTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment