Detailed information NTG0193657

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BARD7_RS15690
• Genome accession: NZ_CP016913
• Coordinates: 3169729..3170892 (-)
• Length: 387 a.a.
• NCBI ID: WP_065982454.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain RD7-7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3164729..3175892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BARD7_RS15660 (BARD7_03199)	-	3164995..3165414 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
BARD7_RS15665	comFC	3165488..3166177 (-)	690	WP_196769352.1	double zinc ribbon domain-containing protein	Machinery gene
BARD7_RS15670 (BARD7_03201)	-	3166183..3166467 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
BARD7_RS15675 (BARD7_03202)	comFA	3166526..3167911 (-)	1386	WP_065982452.1	DEAD/DEAH box helicase	Machinery gene
BARD7_RS15680 (BARD7_03203)	-	3168018..3168866 (-)	849	WP_065982453.1	DegV family protein	-
BARD7_RS15685 (BARD7_03204)	degU	3168963..3169652 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BARD7_RS15690 (BARD7_03205)	degS	3169729..3170892 (-)	1164	WP_065982454.1	two-component sensor histidine kinase DegS	Regulator
BARD7_RS15695 (BARD7_03206)	-	3171115..3171762 (+)	648	WP_065982455.1	YigZ family protein	-
BARD7_RS15700 (BARD7_03207)	-	3171767..3172948 (+)	1182	WP_065982456.1	LCP family protein	-
BARD7_RS15705 (BARD7_03208)	-	3173049..3174125 (-)	1077	WP_060964142.1	glycosyltransferase family 4 protein	-
BARD7_RS15710 (BARD7_03209)	tuaH	3174258..3175454 (-)	1197	WP_065982457.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8617

>NTDB_id=193657 BARD7_RS15690 WP_065982454.1 3169729..3170892(-) (degS) [Bacillus amyloliquefaciens strain RD7-7]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDINEAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=193657 BARD7_RS15690 WP_065982454.1 3169729..3170892(-) (degS) [Bacillus amyloliquefaciens strain RD7-7]
ATGAATAAAACGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTAAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTACATACCCGGCACGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTCCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTGGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGCCCGGCTCAAATGCTGGCAAATGTCATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATCAATGAGGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951