Detailed information NTG0193598

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: S101441_RS01685
• Genome accession: NZ_CP021507
• Coordinates: 320841..321962 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 315841..326962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101441_RS01660 (S101441_00332)	ycdA	315855..316874 (-)	1020	WP_069837224.1	DUF4352 domain-containing protein	-
S101441_RS22290	-	316933..317064 (-)	132	WP_003246334.1	hypothetical protein	-
S101441_RS01665 (S101441_00333)	ycdB	317238..318659 (+)	1422	WP_041335264.1	YcdB/YcdC domain-containing protein	-
S101441_RS01675 (S101441_00334)	ycdC	318846..320207 (+)	1362	WP_026113616.1	YcdB/YcdC domain-containing protein	-
S101441_RS01680 (S101441_00335)	cwlK	320215..320718 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
S101441_RS01685 (S101441_00336)	rapF	320841..321962 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
S101441_RS01690 (S101441_00337)	ycdF	322069..322845 (+)	777	WP_014478742.1	SDR family oxidoreductase	-
S101441_RS01695 (S101441_00338)	ycdG	322869..324554 (+)	1686	WP_031600124.1	alpha-glucosidase	-
S101441_RS01700 (S101441_00339)	znuA	324741..325700 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
S101441_RS01705 (S101441_00340)	znuC	325755..326450 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=193598 S101441_RS01685 WP_069837225.1 320841..321962(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=193598 S101441_RS01685 WP_069837225.1 320841..321962(+) (rapF) [Bacillus subtilis subsp. subtilis strain SRCM101441]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405