Detailed information NTG0193597

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BARD7_RS01945
• Genome accession: NZ_CP016913
• Coordinates: 420476..421624 (+)
• Length: 382 a.a.
• NCBI ID: WP_065980700.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain RD7-7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415476..426624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BARD7_RS01925 (BARD7_00389)	-	415872..416555 (-)	684	WP_065980697.1	ABC transporter ATP-binding protein	-
BARD7_RS01930 (BARD7_00390)	-	416570..418006 (-)	1437	WP_065980698.1	ABC transporter permease	-
BARD7_RS01935 (BARD7_00391)	-	418219..418902 (+)	684	WP_013351002.1	response regulator transcription factor	-
BARD7_RS01940 (BARD7_00392)	-	418889..420316 (+)	1428	WP_161957667.1	sensor histidine kinase	-
BARD7_RS01945 (BARD7_00393)	rapC	420476..421624 (+)	1149	WP_065980700.1	tetratricopeptide repeat protein	Regulator
BARD7_RS01950 (BARD7_00394)	phrC	421608..421727 (+)	120	WP_013351005.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BARD7_RS01955 (BARD7_00395)	-	421875..421985 (-)	111	WP_065980701.1	YjcZ family sporulation protein	-
BARD7_RS01960 (BARD7_00396)	-	422080..423444 (-)	1365	WP_065980702.1	aspartate kinase	-
BARD7_RS01965 (BARD7_00397)	ceuB	423859..424812 (+)	954	WP_065980703.1	ABC transporter permease	Machinery gene
BARD7_RS01970 (BARD7_00398)	-	424802..425749 (+)	948	WP_065980704.1	iron chelate uptake ABC transporter family permease subunit	-
BARD7_RS01975 (BARD7_00399)	-	425743..426501 (+)	759	WP_065980705.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45564.84 Da
• Isoelectric Point: 5.0703

>NTDB_id=193597 BARD7_RS01945 WP_065980700.1 420476..421624(+) (rapC) [Bacillus amyloliquefaciens strain RD7-7]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQNRID
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=193597 BARD7_RS01945 WP_065980700.1 420476..421624(+) (rapC) [Bacillus amyloliquefaciens strain RD7-7]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTACCGATACATAAGAACATTCAGCGT
GCCGGATGCAGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTACTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTATTTGGAGCCGCTGGAGAAATTGAAAATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTCGATAACATAGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATAACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAGCAGGCAGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGAACCGCATCGAT
GAAGCCATACCGTACTTTGAACGGGCAGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTCCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGTGCATGTTTCCGTTACCTCGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571