Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | BEN76_RS11740 | Genome accession | NZ_CP016896 |
| Coordinates | 2460902..2461426 (-) | Length | 174 a.a. |
| NCBI ID | WP_004934225.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain GFJ2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2455902..2466426
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN76_RS11720 (BEN76_11720) | - | 2456197..2457045 (-) | 849 | WP_076033124.1 | hypothetical protein | - |
| BEN76_RS11725 (BEN76_11725) | aroB | 2457055..2458143 (-) | 1089 | WP_076033597.1 | 3-dehydroquinate synthase | - |
| BEN76_RS11730 (BEN76_11730) | aroK | 2458167..2458709 (-) | 543 | WP_004934229.1 | shikimate kinase AroK | - |
| BEN76_RS11735 (BEN76_11735) | comQ | 2458746..2460842 (-) | 2097 | WP_171261644.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| BEN76_RS11740 (BEN76_11740) | comL | 2460902..2461426 (-) | 525 | WP_004934225.1 | pilus assembly protein PilP | Machinery gene |
| BEN76_RS11745 (BEN76_11745) | comO | 2461426..2462160 (-) | 735 | WP_076033126.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BEN76_RS11750 (BEN76_11750) | comN | 2462157..2462795 (-) | 639 | WP_076033598.1 | PilN domain-containing protein | Machinery gene |
| BEN76_RS11755 (BEN76_11755) | comM | 2462782..2463852 (-) | 1071 | WP_004934220.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19215.58 Da Isoelectric Point: 9.0323
>NTDB_id=193532 BEN76_RS11740 WP_004934225.1 2460902..2461426(-) (comL) [Acinetobacter soli strain GFJ2]
MIRQLLCLSVVVLGLAGCDSRIDSVQQQMAAIRSQPPLPIEPAPVFMPVPPYLYSANQLRNPFLPNSIAAELKVMSGKRV
YPNLSRPKQPLESYALESLNMKGSMRRINGQILALIQTPDGEIERVQIGNYMGLNEGRIVAISPTQIDLMEIVPDGRDGF
IERPRSLVLIGPKP
MIRQLLCLSVVVLGLAGCDSRIDSVQQQMAAIRSQPPLPIEPAPVFMPVPPYLYSANQLRNPFLPNSIAAELKVMSGKRV
YPNLSRPKQPLESYALESLNMKGSMRRINGQILALIQTPDGEIERVQIGNYMGLNEGRIVAISPTQIDLMEIVPDGRDGF
IERPRSLVLIGPKP
Nucleotide
Download Length: 525 bp
>NTDB_id=193532 BEN76_RS11740 WP_004934225.1 2460902..2461426(-) (comL) [Acinetobacter soli strain GFJ2]
ATGATACGTCAACTTCTGTGCTTGAGTGTGGTGGTGCTGGGGCTTGCGGGTTGTGATTCACGCATTGACAGTGTGCAGCA
GCAAATGGCCGCTATTCGAAGTCAGCCACCGTTACCGATTGAGCCTGCGCCTGTATTTATGCCTGTTCCGCCCTACCTTT
ATTCTGCCAATCAGTTACGCAATCCATTCTTGCCGAACTCGATTGCCGCAGAACTCAAGGTGATGTCTGGAAAACGCGTT
TACCCAAATCTATCCAGACCCAAACAGCCACTTGAAAGTTATGCGCTTGAATCATTAAACATGAAAGGCAGTATGCGCCG
CATCAATGGCCAAATTCTGGCATTAATTCAAACGCCTGATGGTGAAATTGAGCGTGTACAAATTGGCAATTATATGGGGC
TGAATGAAGGGCGGATTGTAGCCATCTCACCCACACAAATTGATTTAATGGAAATTGTGCCAGATGGACGTGATGGATTT
ATTGAACGGCCACGATCTTTGGTTTTAATTGGACCGAAGCCCTAG
ATGATACGTCAACTTCTGTGCTTGAGTGTGGTGGTGCTGGGGCTTGCGGGTTGTGATTCACGCATTGACAGTGTGCAGCA
GCAAATGGCCGCTATTCGAAGTCAGCCACCGTTACCGATTGAGCCTGCGCCTGTATTTATGCCTGTTCCGCCCTACCTTT
ATTCTGCCAATCAGTTACGCAATCCATTCTTGCCGAACTCGATTGCCGCAGAACTCAAGGTGATGTCTGGAAAACGCGTT
TACCCAAATCTATCCAGACCCAAACAGCCACTTGAAAGTTATGCGCTTGAATCATTAAACATGAAAGGCAGTATGCGCCG
CATCAATGGCCAAATTCTGGCATTAATTCAAACGCCTGATGGTGAAATTGAGCGTGTACAAATTGGCAATTATATGGGGC
TGAATGAAGGGCGGATTGTAGCCATCTCACCCACACAAATTGATTTAATGGAAATTGTGCCAGATGGACGTGATGGATTT
ATTGAACGGCCACGATCTTTGGTTTTAATTGGACCGAAGCCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Acinetobacter baylyi ADP1 |
79.31 |
100 |
0.793 |
| pilP | Acinetobacter baumannii D1279779 |
70.52 |
99.425 |
0.701 |