Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   BEN76_RS01350 Genome accession   NZ_CP016896
Coordinates   298268..300694 (+) Length   808 a.a.
NCBI ID   WP_076032021.1    Uniprot ID   A0A1P8EEU1
Organism   Acinetobacter soli strain GFJ2     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 293268..305694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN76_RS01325 (BEN76_01325) - 293393..294331 (-) 939 WP_076032019.1 hypothetical protein -
  BEN76_RS01330 (BEN76_01330) - 294553..295020 (+) 468 WP_004939433.1 YaiI/YqxD family protein -
  BEN76_RS01335 (BEN76_01335) - 295029..295934 (+) 906 WP_076032020.1 DMT family transporter -
  BEN76_RS01340 (BEN76_01340) - 296276..297511 (+) 1236 WP_004939428.1 lipoprotein-releasing ABC transporter permease subunit -
  BEN76_RS01345 (BEN76_01345) lolD 297504..298190 (+) 687 WP_004939423.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  BEN76_RS01350 (BEN76_01350) comA/comEC 298268..300694 (+) 2427 WP_076032021.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  BEN76_RS01355 (BEN76_01355) - 300627..301643 (-) 1017 WP_004939417.1 lysophospholipid acyltransferase family protein -
  BEN76_RS01360 (BEN76_01360) sppA 301777..302793 (+) 1017 WP_076032022.1 signal peptide peptidase SppA -
  BEN76_RS01365 (BEN76_01365) - 302808..303611 (+) 804 WP_076032023.1 alpha/beta fold hydrolase -
  BEN76_RS01370 (BEN76_01370) purN 303671..304303 (-) 633 WP_076032024.1 phosphoribosylglycinamide formyltransferase -
  BEN76_RS01375 (BEN76_01375) purM 304300..305370 (-) 1071 WP_004939407.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 808 a.a.        Molecular weight: 91392.06 Da        Isoelectric Point: 8.5528

>NTDB_id=193509 BEN76_RS01350 WP_076032021.1 298268..300694(+) (comA/comEC) [Acinetobacter soli strain GFJ2]
MLKLIFLGWIAGIATMGHIFDPISPVTLGIAIGLYFLFLLIYLRVAQQFNSSKLLGGLLGIFSVCLSFNCGVYYADQALT
TRLEHRVTTSSVDSYIIYINRMGEQSQNGIRQPAQILNENDAPIHWVLSIDETVIPADTMAHSLAVGQYYRAVIQRQPVH
GYATQGAFDVKKWFVQQNWQGRGKVVQLEMLSSEQALREGYYDHVKQQQSWTRKFLLAAEHLRLKFRGYFLASSLQHQSL
LLALLTGDRSLLDPELEQQFQRFGISHLLAISGPHVLIFAALMTWCIIQLINRYYAAIYLVIPRQRLMLIPFLLCVLLYC
ALVGFEIPALRTLLTVTIVSIFILLKRPVHASFLLLFSASILLLIDPFSILSAAFWLSYGACFILIRIYQEIVQEQKTGQ
SWRIRIGYAAQLLIRTQWKIFLALLPLTLLLFKQFSWMTPFANIIAIPVLGAIVVPLDVIAACFWLILPAFGHLIFQLND
GVLQAVLGLFNMMDYIFAPELQYFALRPWMIISISFGILILFLPKGTVPKCWSIICCVPVFLPAQLKSPTQLVVLDVGQG
QSVFIQDQTQRILLDTGGNHDEQKFSVGRQVVVPFLKAQGVKQLDRIILSHLDQDHSGALPAILDAISVTQIQANEPMPK
LQSTFELCYAGQRFETPETIIQVLSPALQEIGRADTNRNESSCVMHIEFKNNQPIRHFLIMGDAGWETEFKLLQHYPDLR
VDVLVLGHHGSRHSSAYDFLQHYRPQYAIASAGATNRYGHPSIEVQARLAALQIPLLSTAKAGSISFSFDQANGQPRFYR
HQYRWLTQ

Nucleotide


Download         Length: 2427 bp        

>NTDB_id=193509 BEN76_RS01350 WP_076032021.1 298268..300694(+) (comA/comEC) [Acinetobacter soli strain GFJ2]
ATGCTAAAGCTTATTTTTCTGGGGTGGATTGCAGGAATTGCAACCATGGGGCATATATTTGATCCAATATCGCCTGTCAC
ACTCGGTATCGCGATCGGTCTATATTTCCTATTTTTACTCATCTATCTACGTGTGGCCCAACAGTTCAACTCTTCGAAAT
TGTTAGGCGGCTTATTGGGCATCTTTTCGGTGTGTTTGTCGTTTAACTGTGGCGTCTATTACGCCGATCAGGCACTCACC
ACGCGGCTTGAGCATCGTGTCACGACCTCTTCAGTCGACTCATACATCATCTACATCAACCGTATGGGGGAGCAGTCTCA
AAACGGAATCAGACAGCCTGCACAGATTCTCAATGAAAATGATGCTCCCATTCACTGGGTACTTTCCATAGATGAAACAG
TTATCCCTGCTGATACCATGGCGCATAGTTTAGCTGTTGGGCAGTATTATCGTGCCGTGATTCAGCGTCAACCTGTGCAT
GGTTACGCTACACAAGGTGCATTCGATGTAAAAAAATGGTTCGTACAACAAAACTGGCAAGGGCGTGGCAAAGTTGTACA
ACTCGAAATGCTTTCAAGTGAACAGGCGCTACGTGAAGGATATTATGATCATGTGAAACAGCAACAATCTTGGACTCGAA
AATTTTTGCTTGCTGCCGAGCACTTAAGATTAAAATTTAGAGGCTATTTTCTTGCTTCTTCCTTACAACATCAAAGCTTA
CTTCTGGCCTTACTCACGGGCGATCGAAGTCTTCTTGATCCTGAGCTTGAGCAGCAGTTTCAACGCTTTGGTATTTCACA
TTTGCTGGCGATATCTGGGCCGCACGTGCTTATTTTTGCAGCGCTAATGACATGGTGTATCATCCAATTGATCAATCGAT
ACTACGCCGCAATTTATTTGGTGATTCCACGCCAGCGACTGATGCTGATTCCATTTTTATTATGCGTACTCCTGTATTGC
GCGTTGGTGGGGTTTGAAATTCCTGCTCTAAGAACGCTGCTGACCGTAACCATAGTGAGTATTTTCATACTTTTAAAACG
TCCTGTACATGCCAGTTTCTTGTTGCTGTTCAGTGCTTCTATTTTGTTACTCATCGATCCGTTTAGCATACTCTCGGCAG
CATTCTGGCTATCTTATGGGGCCTGTTTTATTCTGATTCGTATTTATCAGGAAATTGTACAGGAGCAAAAGACTGGTCAA
TCTTGGCGTATTCGAATCGGATATGCTGCGCAGCTTCTTATCAGAACACAATGGAAAATCTTTCTCGCACTGTTACCCCT
GACCTTATTGCTCTTTAAACAGTTTTCTTGGATGACTCCATTTGCCAATATCATTGCCATTCCAGTTCTGGGTGCCATCG
TGGTGCCTTTAGATGTTATCGCTGCATGCTTCTGGCTCATCCTTCCTGCATTTGGACATTTGATTTTTCAACTCAATGAT
GGGGTATTACAGGCTGTTTTGGGTCTGTTTAATATGATGGATTATATCTTTGCACCAGAGTTACAATATTTTGCACTTCG
TCCTTGGATGATCATCAGCATTTCATTTGGCATTTTAATTTTATTTTTGCCTAAGGGCACAGTGCCTAAATGCTGGTCAA
TCATATGCTGTGTGCCTGTTTTTCTACCTGCACAATTAAAATCACCTACCCAATTAGTGGTATTAGATGTCGGTCAAGGA
CAGTCTGTGTTCATCCAAGATCAGACACAACGAATACTGCTCGATACTGGCGGCAATCACGACGAGCAAAAGTTTAGTGT
AGGCAGGCAGGTGGTGGTGCCATTTTTGAAGGCACAGGGCGTAAAGCAGCTAGACCGAATTATACTGTCACATTTAGATC
AAGATCATAGCGGGGCATTACCCGCGATTCTGGATGCAATATCGGTTACGCAGATTCAAGCCAATGAACCAATGCCTAAA
CTTCAATCTACTTTTGAGCTGTGCTATGCCGGACAGCGTTTTGAGACACCTGAAACCATTATACAAGTTTTATCACCAGC
GCTTCAGGAGATCGGACGTGCTGATACGAATCGAAATGAATCGTCATGTGTTATGCATATCGAGTTTAAAAACAATCAAC
CCATACGACATTTTTTAATTATGGGAGATGCAGGTTGGGAAACCGAGTTTAAATTACTTCAACATTATCCGGATCTGCGC
GTAGATGTTTTGGTTTTGGGGCATCACGGGAGTCGTCATAGTTCAGCCTATGATTTTTTACAGCATTATCGGCCTCAATA
TGCGATTGCATCGGCAGGTGCAACCAATCGTTATGGACATCCTAGCATTGAAGTTCAGGCACGACTGGCAGCGTTACAAA
TTCCTTTACTCAGCACAGCCAAAGCAGGCAGTATTTCTTTTAGTTTTGATCAAGCGAATGGGCAGCCACGTTTTTATCGC
CATCAATACCGCTGGTTAACACAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1P8EEU1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

56.328

99.752

0.562

  comA/comEC Acinetobacter baumannii D1279779

48.045

98.144

0.472

  comA/comEC Acinetobacter baumannii strain A118

48.045

98.144

0.472


Multiple sequence alignment