Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   BFG52_RS14895 Genome accession   NZ_CP016895
Coordinates   3359461..3360588 (-) Length   375 a.a.
NCBI ID   WP_067557973.1    Uniprot ID   -
Organism   Acinetobacter larvae strain BRTC-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3354461..3365588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFG52_RS14890 (BFG52_14890) - 3358847..3359416 (-) 570 WP_067557970.1 Sua5/YciO/YrdC/YwlC family protein -
  BFG52_RS14895 (BFG52_14895) dprA 3359461..3360588 (-) 1128 WP_067557973.1 DNA-processing protein DprA Machinery gene
  BFG52_RS14900 (BFG52_14900) def 3360839..3361357 (+) 519 WP_067557976.1 peptide deformylase -
  BFG52_RS14905 (BFG52_14905) - 3361440..3361910 (+) 471 WP_067557979.1 DUF2946 family protein -
  BFG52_RS14910 (BFG52_14910) - 3361977..3364106 (+) 2130 WP_067557982.1 TonB-dependent receptor domain-containing protein -
  BFG52_RS14915 (BFG52_14915) - 3364293..3365183 (-) 891 WP_067557985.1 DMT family transporter -

Sequence

Protein


Download         Length: 375 a.a.        Molecular weight: 42169.96 Da        Isoelectric Point: 6.7804

>NTDB_id=193505 BFG52_RS14895 WP_067557973.1 3359461..3360588(-) (dprA) [Acinetobacter larvae strain BRTC-1]
MLDEISDCDVATIRLWYLVQHSIHAYRKLLKHFGSALEATSSTALSHWSTLQLHQGHIQRAQQFKQTEGQVAFQRCLEQV
QQHTDHIVTEQQRQYPQQLSIYSDRPPILFIQGAWQNLSQPQIAIVGSRKASPHGKQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHLGALAHQRTMAVVATGLDSTYPSQNQQLKQKILQNAGSIISEYLPLTLPLQHHFPRRNRIVSGLSLGVLVAEAK
HNSGSLITAQAAAEQGKVTFAIPGHIYAEHHQGCHQLIREGAILVDHPEQIIEDLALPTQWQCQQQNEQPITPTQIPEHL
YLVYQQLDWIGQDLDQLAIKLEMNVAQLTAALMELELIGVCIQQSGLYLRCRMSH

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=193505 BFG52_RS14895 WP_067557973.1 3359461..3360588(-) (dprA) [Acinetobacter larvae strain BRTC-1]
ATGCTTGATGAAATTTCTGATTGCGATGTCGCAACGATTCGGCTGTGGTATCTGGTACAGCATTCTATTCATGCATATCG
GAAGCTATTAAAACATTTTGGCTCCGCACTTGAAGCCACCTCAAGTACGGCATTAAGTCATTGGTCTACCCTACAATTAC
ATCAAGGGCATATCCAGCGTGCGCAGCAGTTTAAGCAAACAGAAGGTCAAGTCGCTTTCCAGCGGTGTCTAGAGCAGGTA
CAACAACATACAGATCATATTGTGACCGAGCAACAGCGCCAATACCCGCAGCAGTTATCCATCTATAGTGATCGACCGCC
GATACTTTTTATTCAAGGGGCATGGCAAAATTTATCTCAACCGCAGATTGCTATTGTGGGAAGCCGTAAAGCCAGCCCAC
ATGGTAAACAAGTTGCTTATGATTTTGCCTACTACTTAAGTGAGAAAGGCTTTTTTATTAATAGTGGTTTAGCACAAGGC
ATTGATGAGGCTGCACATCTGGGTGCCTTGGCTCACCAACGCACAATGGCAGTGGTTGCAACGGGGTTAGATTCGACTTA
TCCATCTCAAAATCAACAATTGAAGCAAAAAATATTACAAAATGCAGGCAGTATTATTAGTGAATATCTTCCCTTAACTT
TACCGCTACAACATCATTTTCCGCGGCGTAATCGGATTGTAAGTGGGCTGAGCTTAGGTGTGCTCGTTGCTGAAGCCAAG
CATAATAGCGGTTCATTGATTACTGCCCAAGCTGCTGCAGAACAAGGTAAAGTTACTTTTGCTATCCCAGGGCATATTTA
TGCAGAACATCATCAAGGTTGTCATCAGCTGATTCGTGAGGGCGCTATTTTAGTCGATCATCCAGAACAGATTATTGAAG
ATCTTGCTTTACCGACGCAATGGCAATGCCAGCAACAAAATGAACAACCGATTACACCAACACAGATTCCAGAACATCTA
TATTTAGTCTATCAGCAGCTCGATTGGATTGGGCAAGATCTAGATCAATTGGCGATTAAACTAGAGATGAATGTCGCACA
ACTGACAGCTGCATTAATGGAATTAGAGTTGATCGGTGTTTGTATTCAGCAGTCTGGTTTGTACTTACGTTGCCGAATGA
GCCATTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(83-286)

DprA winged helix domain (DprA_WH)

(323-366)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.2

100

0.632
  dprA Acinetobacter baumannii D1279779

62.933

100

0.629
  dprA Acinetobacter baylyi ADP1

60.526

100

0.613

Multiple sequence alignment