Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   BFG52_RS06625 Genome accession   NZ_CP016895
Coordinates   1506508..1507209 (-) Length   233 a.a.
NCBI ID   WP_067559248.1    Uniprot ID   A0A1B2M3Z2
Organism   Acinetobacter larvae strain BRTC-1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501508..1512209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFG52_RS06600 (BFG52_06600) - 1501739..1502710 (+) 972 WP_067559245.1 D-glycerate dehydrogenase -
  BFG52_RS06605 (BFG52_06605) - 1502815..1504254 (+) 1440 WP_067553800.1 M48 family metalloprotease -
  BFG52_RS06610 (BFG52_06610) - 1504453..1504899 (-) 447 WP_067553802.1 GatB/YqeY domain-containing protein -
  BFG52_RS06615 (BFG52_06615) rpsU 1504933..1505148 (-) 216 WP_001136722.1 30S ribosomal protein S21 -
  BFG52_RS06620 (BFG52_06620) tsaD 1505290..1506300 (+) 1011 WP_067553804.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  BFG52_RS06625 (BFG52_06625) crp 1506508..1507209 (-) 702 WP_067559248.1 cAMP-activated global transcriptional regulator CRP Regulator
  BFG52_RS06630 (BFG52_06630) - 1507361..1507786 (+) 426 WP_067553806.1 OsmC family protein -
  BFG52_RS06635 (BFG52_06635) - 1507934..1508365 (+) 432 WP_081408640.1 GNAT family N-acetyltransferase -
  BFG52_RS06640 (BFG52_06640) clpB 1508660..1511239 (+) 2580 WP_067553807.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 26095.76 Da        Isoelectric Point: 4.9004

>NTDB_id=193494 BFG52_RS06625 WP_067559248.1 1506508..1507209(-) (crp) [Acinetobacter larvae strain BRTC-1]
MASNFSYLSTDALSPGQLPESVKALLKRANINRFPKRMTIIDAGTESKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFEPHSLRTAEVRTRDTCEIAEISYENFHQLSQQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDSSLEEAESESTANDA

Nucleotide


Download         Length: 702 bp        

>NTDB_id=193494 BFG52_RS06625 WP_067559248.1 1506508..1507209(-) (crp) [Acinetobacter larvae strain BRTC-1]
ATGGCTTCAAATTTTTCCTATTTAAGCACCGACGCTTTGTCTCCAGGGCAACTGCCTGAATCAGTCAAAGCACTCCTCAA
ACGTGCAAATATCAATCGTTTCCCCAAACGAATGACCATCATCGATGCTGGGACTGAATCTAAGTCTCTTTATCTGATTT
TAAAAGGTTCAGTTTCTATTATTTTACGAGAAGACGATGACCGTGAAATTGTAGTCGCTTATCTGAATCCTGGTGATTTT
TTTGGCGAGATGGGTTTATTCGAACCGCACTCTCTGCGTACTGCCGAAGTCAGAACACGAGATACCTGTGAAATTGCTGA
AATCAGTTATGAAAATTTTCATCAACTCAGCCAACAATATCCAGACCTCAGCTATGCTGTTTTTGCGCAACTTGTTCGTC
GTTTGAAGAACACCACACGTAAAGTTACGGATTTAGCCTTTATCGATGTTTCTGGTCGTATTGCACGTTGTTTGATTGAC
CTTTCTGCACAACCAGAAGCAATGATCTTACCAAACGGTCGCCAAATTCGTATTACCCGTCAAGAAATTGGTCGTATTGT
TGGATGTTCTCGTGAAATGGTTGGACGTGTCTTGAAGACCTTAGAAGAACAAGGCATGATCGAAACAGACGGTAAAGCCA
TCTTGATTTTTGATAGCTCACTTGAAGAAGCAGAGTCAGAATCAACAGCCAATGATGCTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, crp family (Crp)

(176-207)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B2M3Z2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.071

96.137

0.876
  crp Vibrio cholerae strain A1552

48.077

89.27

0.429
  crp Haemophilus influenzae Rd KW20

49.744

83.691

0.416

Multiple sequence alignment