Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   BE841_RS08635 Genome accession   NZ_CP016868
Coordinates   1947603..1947920 (-) Length   105 a.a.
NCBI ID   WP_011215002.1    Uniprot ID   Q5WY96
Organism   Legionella pneumophila subsp. pneumophila strain FFI102     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1942603..1952920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BE841_RS08615 (BE841_08615) - 1943511..1944209 (-) 699 WP_011215005.1 hypothetical protein -
  BE841_RS08620 (BE841_08620) - 1944470..1945072 (+) 603 WP_011215004.1 pseudouridine synthase -
  BE841_RS15435 mreD 1945008..1945487 (-) 480 WP_011215003.1 rod shape-determining protein MreD -
  BE841_RS08625 (BE841_08625) mreC 1945484..1946392 (-) 909 WP_010946548.1 rod shape-determining protein MreC -
  BE841_RS08630 (BE841_08630) - 1946370..1947407 (-) 1038 WP_011213320.1 rod shape-determining protein -
  BE841_RS08635 (BE841_08635) comEA 1947603..1947920 (-) 318 WP_011215002.1 ComEA family DNA-binding protein Machinery gene
  BE841_RS08640 (BE841_08640) - 1948012..1949427 (-) 1416 WP_011215001.1 M20 family metallopeptidase -
  BE841_RS08645 (BE841_08645) - 1949402..1950493 (-) 1092 WP_011215000.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  BE841_RS08650 (BE841_08650) nadC 1950490..1951332 (-) 843 WP_011214999.1 carboxylating nicotinate-nucleotide diphosphorylase -
  BE841_RS08655 (BE841_08655) - 1951329..1952768 (-) 1440 WP_011214998.1 cation:proton antiporter -

Sequence


Protein


Download         Length: 105 a.a.        Molecular weight: 11713.73 Da        Isoelectric Point: 10.6194

>NTDB_id=193054 BE841_RS08635 WP_011215002.1 1947603..1947920(-) (comEA) [Legionella pneumophila subsp. pneumophila strain FFI102]
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN

Nucleotide


Download         Length: 318 bp        

>NTDB_id=193054 BE841_RS08635 WP_011215002.1 1947603..1947920(-) (comEA) [Legionella pneumophila subsp. pneumophila strain FFI102]
ATGAAAGCAAGACTCATTGCTATTTTGTTATCAATTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTACATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGTGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGGTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA

Domains


Predicted by InterproScan.

(37-98)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5WY96

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

98.095

100

0.981

  comEA Legionella pneumophila strain ERS1305867

98.095

100

0.981

  comEA Staphylococcus aureus N315

38.384

94.286

0.362

  comEA Staphylococcus aureus MW2

38.384

94.286

0.362


Multiple sequence alignment