Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   A6L51_RS08685 Genome accession   NZ_CP016672
Coordinates   1659477..1660091 (-) Length   204 a.a.
NCBI ID   WP_002258537.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22828     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1654477..1665091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L51_RS12790 - 1654965..1655716 (+) 752 WP_096001759.1 IS5-like element IS1301 family transposase -
  A6L51_RS08670 (A6L51_08670) pilX 1657486..1657959 (-) 474 WP_002258540.1 PilX family type IV pilin Machinery gene
  A6L51_RS08675 (A6L51_08675) pilK 1657964..1658560 (-) 597 WP_002258539.1 pilus assembly PilX family protein Machinery gene
  A6L51_RS08680 (A6L51_08680) pilJ 1658539..1659480 (-) 942 WP_065826198.1 PilW family protein Machinery gene
  A6L51_RS08685 (A6L51_08685) pilV 1659477..1660091 (-) 615 WP_002258537.1 type IV pilus modification protein PilV Machinery gene
  A6L51_RS08690 (A6L51_08690) pilH 1660121..1660786 (-) 666 WP_065826199.1 GspH/FimT family pseudopilin Machinery gene
  A6L51_RS08695 (A6L51_08695) dnaB 1661095..1662501 (-) 1407 WP_002220671.1 replicative DNA helicase -
  A6L51_RS08700 (A6L51_08700) - 1662664..1663251 (+) 588 WP_002258535.1 superoxide dismutase -
  A6L51_RS08705 (A6L51_08705) - 1663935..1664444 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22147.10 Da        Isoelectric Point: 4.9586

>NTDB_id=191255 A6L51_RS08685 WP_002258537.1 1659477..1660091(-) (pilV) [Neisseria meningitidis strain M22828]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSVVDGDFQVDAIKTKTQLAEAQLKRFSYELKNALPDAAAIYYAICKDSSGVAPTLSAGSTFSSNCDASA
NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 615 bp        

>NTDB_id=191255 A6L51_RS08685 WP_002258537.1 1659477..1660091(-) (pilV) [Neisseria meningitidis strain M22828]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGTTGTGGATGGCGATTTTCAGGTTGATGCCATAAAAACTAAGAC
GCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCTATTACG
CCATCTGCAAGGATTCGTCGGGTGTTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTTCAAATTGCGATGCTAGTGCA
AATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGAC
GAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

90.338

100

0.917
  pilI Neisseria gonorrhoeae MS11

83.333

100

0.833
  pilV Neisseria gonorrhoeae MS11

83.333

100

0.833

Multiple sequence alignment