Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   A6L64_RS09195 Genome accession   NZ_CP016664
Coordinates   1799776..1800387 (+) Length   203 a.a.
NCBI ID   WP_002248273.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M25070     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1794776..1805387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L64_RS14715 - 1794868..1794975 (+) 108 Protein_1699 IS5/IS1182 family transposase -
  A6L64_RS09170 (A6L64_09170) - 1795020..1795352 (+) 333 WP_002226445.1 hypothetical protein -
  A6L64_RS09175 (A6L64_09175) - 1795684..1796193 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  A6L64_RS09180 (A6L64_09180) - 1796765..1797352 (-) 588 WP_002220670.1 superoxide dismutase -
  A6L64_RS09185 (A6L64_09185) dnaB 1797515..1798921 (+) 1407 WP_002248271.1 replicative DNA helicase -
  A6L64_RS09190 (A6L64_09190) - 1799076..1799752 (+) 677 Protein_1704 GspH/FimT family pseudopilin -
  A6L64_RS09195 (A6L64_09195) pilV 1799776..1800387 (+) 612 WP_002248273.1 type IV pilus modification protein PilV Machinery gene
  A6L64_RS09200 (A6L64_09200) pilJ 1800384..1801322 (+) 939 WP_002248274.1 PilW family protein Machinery gene
  A6L64_RS09205 (A6L64_09205) pilK 1801301..1801894 (+) 594 WP_002248275.1 pilus assembly PilX family protein Machinery gene
  A6L64_RS09210 (A6L64_09210) pilX 1801899..1802372 (+) 474 WP_002248276.1 PilX family type IV pilin Machinery gene
  A6L64_RS09215 (A6L64_09215) - 1804276..1804704 (-) 429 Protein_1709 AzlC family ABC transporter permease -
  A6L64_RS09220 (A6L64_09220) dut 1804847..1805299 (+) 453 WP_002220679.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22100.14 Da        Isoelectric Point: 4.8335

>NTDB_id=190897 A6L64_RS09195 WP_002248273.1 1799776..1800387(+) (pilV) [Neisseria meningitidis strain M25070]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMRNHTLSAVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIRYAVCKDSLGAAPTLSAGSTFSPNCDNKAN
GDTLIKVLWVNDSAGDSDIARTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=190897 A6L64_RS09195 WP_002248273.1 1799776..1800387(+) (pilV) [Neisseria meningitidis strain M25070]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGAGAAACCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCGTTACGCCG
TCTGCAAGGATTCGTTGGGTGCTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTCCAAATTGCGATAATAAGGCAAAC
GGAGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

91.304

100

0.931
  pilI Neisseria gonorrhoeae MS11

82.266

100

0.823
  pilV Neisseria gonorrhoeae MS11

82.266

100

0.823

Multiple sequence alignment