Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | A6L48_RS05295 | Genome accession | NZ_CP016654 |
| Coordinates | 997162..997758 (+) | Length | 198 a.a. |
| NCBI ID | WP_002258539.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M22811 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 992162..1002758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6L48_RS05270 (A6L48_05270) | - | 992471..993058 (-) | 588 | WP_002258535.1 | superoxide dismutase | - |
| A6L48_RS05275 (A6L48_05275) | dnaB | 993221..994627 (+) | 1407 | WP_002220671.1 | replicative DNA helicase | - |
| A6L48_RS05280 (A6L48_05280) | pilH | 994936..995601 (+) | 666 | WP_002258536.1 | GspH/FimT family pseudopilin | Machinery gene |
| A6L48_RS05285 (A6L48_05285) | pilV | 995631..996245 (+) | 615 | WP_002258537.1 | type IV pilus modification protein PilV | Machinery gene |
| A6L48_RS05290 (A6L48_05290) | pilJ | 996242..997183 (+) | 942 | WP_002258538.1 | PilW family protein | Machinery gene |
| A6L48_RS05295 (A6L48_05295) | pilK | 997162..997758 (+) | 597 | WP_002258539.1 | pilus assembly PilX family protein | Machinery gene |
| A6L48_RS05300 (A6L48_05300) | pilX | 997763..998236 (+) | 474 | WP_002258540.1 | PilX family type IV pilin | Machinery gene |
| A6L48_RS05315 (A6L48_05315) | - | 1001638..1002066 (-) | 429 | Protein_995 | AzlC family ABC transporter permease | - |
| A6L48_RS05320 (A6L48_05320) | dut | 1002211..1002663 (+) | 453 | WP_002258542.1 | dUTP diphosphatase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21830.74 Da Isoelectric Point: 5.3906
>NTDB_id=190411 A6L48_RS05295 WP_002258539.1 997162..997758(+) (pilK) [Neisseria meningitidis strain M22811]
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCAKGLCTAVNVRTNNTGNEEAFDNIVVQDNPTVEAVKRSCPANSTDLCIDKKGMKYKKGTRSVSEMPRYII
EYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNTEQRISANESDRKLALSLAEAALREGELQVLDLEYDT
DSKVTFSENCAKGLCTAVNVRTNNTGNEEAFDNIVVQDNPTVEAVKRSCPANSTDLCIDKKGMKYKKGTRSVSEMPRYII
EYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE
Nucleotide
Download Length: 597 bp
>NTDB_id=190411 A6L48_RS05295 WP_002258539.1 997162..997758(+) (pilK) [Neisseria meningitidis strain M22811]
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTCGCGCTGTTTATCGTACTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGCAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATACTGGTAA
TGAAGAGGCTTTTGACAATATCGTGGTGCAAGACAATCCCACCGTTGAGGCGGTGAAGCGTTCTTGCCCTGCAAATTCTA
CCGACCTGTGCATTGACAAGAAAGGGATGAAATATAAGAAAGGCACGAGAAGCGTCAGCGAAATGCCACGTTATATTATC
GAATATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGT
CGTCCTTCAATCTTATGTAAGCAATAATGATGAGTAA
ATGCGCAAACAGAACACTTTGACGGGAATCCCGACTTCTGACGGACAGAGGGGGTTCGCGCTGTTTATCGTACTGATGGT
GATGATCGTCGTGGCTTTTTTGGTTGTAACTGCCGCGCAGTCTTACAATACCGAGCAGCGGATCAGTGCCAACGAATCAG
ACAGGAAATTGGCTTTGTCTTTGGCCGAGGCGGCTTTGCGGGAAGGCGAACTTCAGGTTTTGGATTTGGAATATGATACG
GACAGTAAGGTTACATTTAGCGAAAACTGTGCAAAAGGTCTGTGTACCGCAGTGAATGTGCGGACAAATAATACTGGTAA
TGAAGAGGCTTTTGACAATATCGTGGTGCAAGACAATCCCACCGTTGAGGCGGTGAAGCGTTCTTGCCCTGCAAATTCTA
CCGACCTGTGCATTGACAAGAAAGGGATGAAATATAAGAAAGGCACGAGAAGCGTCAGCGAAATGCCACGTTATATTATC
GAATATTTGGGCGTGAAGAACGGAGAAAATGTTTATCGGGTTACTGCCAAGGCTTGGGGTAAGAATGCCAATACCGTGGT
CGTCCTTCAATCTTATGTAAGCAATAATGATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
86.139 |
100 |
0.879 |