Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6L47_RS07605 Genome accession   NZ_CP016647
Coordinates   1445060..1445755 (-) Length   231 a.a.
NCBI ID   WP_002234519.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22809     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 1428087..1446585 1445060..1445755 within 0


Gene organization within MGE regions


Location: 1428087..1446585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L47_RS07500 (A6L47_07500) - 1428087..1428575 (-) 489 WP_002258458.1 hypothetical protein -
  A6L47_RS07505 (A6L47_07505) - 1430221..1430466 (-) 246 WP_002212272.1 hypothetical protein -
  A6L47_RS07515 (A6L47_07515) - 1430578..1431006 (+) 429 WP_002212270.1 CopD family protein -
  A6L47_RS07520 (A6L47_07520) - 1431018..1431494 (+) 477 WP_002231682.1 CYTH domain-containing protein -
  A6L47_RS07525 (A6L47_07525) - 1431844..1432332 (-) 489 WP_002218701.1 dihydrofolate reductase -
  A6L47_RS07530 (A6L47_07530) aroG 1432400..1433455 (-) 1056 WP_002212267.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  A6L47_RS13970 - 1433617..1433844 (-) 228 WP_153310284.1 hypothetical protein -
  A6L47_RS07540 (A6L47_07540) - 1434122..1434379 (+) 258 WP_002231679.1 membrane protein -
  A6L47_RS07545 (A6L47_07545) - 1434361..1434570 (-) 210 Protein_1399 transposase -
  A6L47_RS07550 (A6L47_07550) - 1434735..1435388 (-) 654 WP_019742811.1 IS1595 family transposase -
  A6L47_RS14600 - 1435508..1435966 (-) 459 WP_002234522.1 hypothetical protein -
  A6L47_RS14370 (A6L47_07560) comE 1436078..1436542 (-) 465 WP_164993478.1 ComEA family DNA-binding protein Machinery gene
  A6L47_RS07595 (A6L47_07595) - 1442333..1443139 (-) 807 WP_002221447.1 cytochrome C assembly family protein -
  A6L47_RS07600 (A6L47_07600) ffh 1443359..1444729 (+) 1371 WP_002258651.1 signal recognition particle protein -
  A6L47_RS07605 (A6L47_07605) dsbA2 1445060..1445755 (-) 696 WP_002234519.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6L47_RS07610 (A6L47_07610) - 1445926..1446585 (-) 660 WP_002218694.1 NYN domain-containing protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25447.95 Da        Isoelectric Point: 5.1502

>NTDB_id=190084 A6L47_RS07605 WP_002234519.1 1445060..1445755(-) (dsbA2) [Neisseria meningitidis strain M22809]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=190084 A6L47_RS07605 WP_002234519.1 1445060..1445755(-) (dsbA2) [Neisseria meningitidis strain M22809]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.567

100

0.996

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment