Detailed information NTG0188334

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: BSY238_RS04330
• Genome accession: NZ_CP016448
• Coordinates: 963569..964918 (-)
• Length: 449 a.a.
• NCBI ID: WP_069038058.1
• Uniprot ID: A0A1B3LS29
• Organism: Methyloversatilis sp. RAC08
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 958569..969918

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSY238_RS04320 (BSY238_875)	-	959742..962594 (-)	2853	WP_069038056.1	ribonucleoside-diphosphate reductase subunit alpha	-
BSY238_RS04325 (BSY238_876)	ampD	962774..963319 (-)	546	WP_069038057.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
BSY238_RS04330 (BSY238_877)	pilR	963569..964918 (-)	1350	WP_069038058.1	sigma-54 dependent transcriptional regulator	Regulator
BSY238_RS04335 (BSY238_878)	-	964888..966519 (-)	1632	WP_223300264.1	ATP-binding protein	-
BSY238_RS04340 (BSY238_879)	-	966491..966733 (-)	243	WP_069038060.1	PP0621 family protein	-
BSY238_RS04350 (BSY238_881)	-	967118..968047 (-)	930	WP_069040448.1	polyprenyl synthetase family protein	-
BSY238_RS04355 (BSY238_882)	rplU	968229..968540 (+)	312	WP_069038061.1	50S ribosomal protein L21	-
BSY238_RS04360 (BSY238_883)	rpmA	968591..968854 (+)	264	WP_069038062.1	50S ribosomal protein L27	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49300.24 Da
• Isoelectric Point: 5.8621

>NTDB_id=188334 BSY238_RS04330 WP_069038058.1 963569..964918(-) (pilR) [Methyloversatilis sp. RAC08]
MERRRSQLELKVLVVDDEDDLRELIDMSLARMGLHASLAGTVAQARDFLAREQFALCLTDMRLPDGEGMDLVRHIAEHHR
DLPVAVITAYGSMDNAVAALKAGAFDYLAKPVSIEQLRALVRSALDLPGRNAASPAQGADALVGDAPALVHVRDMITKLA
RSSAPVNIQGESGSGKERAARLIHELGARRAGPFIAVNCGAIPETLVESEFFGYTKGAFTGADADREGHFQAAKGGTLFL
DEVGDLPLSMQVKLLRAIQEKSVRRVGARSEESTDIRLISATHRNLKQMVDDGRFRQDLFYRLNVLELRMPSLRECRESI
PQLAQTLLDRIAAPDHAHPVLTRAAIDALCAYPFPGNVRELENVLERAYALSAEAQIDAADLGLMPADDDAPADPAGELP
LQDYLDRMERAAIEDALRKTRYNRTAAARLLGVTFRSLRYRLQRLGINE

Nucleotide

• Length: 1350 bp

>NTDB_id=188334 BSY238_RS04330 WP_069038058.1 963569..964918(-) (pilR) [Methyloversatilis sp. RAC08]
ATGGAACGTCGGCGATCACAACTTGAGCTGAAAGTGCTGGTGGTCGACGACGAAGACGATCTGCGCGAGCTGATCGACAT
GTCGCTGGCCCGCATGGGCCTGCATGCGTCGCTCGCCGGCACCGTCGCACAGGCGCGCGACTTCCTCGCGCGCGAGCAGT
TCGCGCTGTGCCTGACCGACATGCGCCTTCCGGACGGCGAAGGCATGGATCTGGTGCGCCACATCGCCGAACACCACCGC
GACCTGCCGGTCGCCGTCATCACCGCCTACGGCAGCATGGACAACGCGGTCGCTGCGCTGAAGGCGGGTGCCTTCGATTA
TCTGGCCAAGCCGGTGTCGATCGAACAGCTGCGCGCGCTGGTGCGTTCCGCGCTCGACCTGCCGGGTCGCAACGCCGCGT
CGCCGGCACAGGGCGCCGATGCGCTGGTCGGTGACGCGCCGGCGCTGGTGCATGTGCGCGACATGATCACCAAGCTGGCG
CGCAGCAGTGCGCCGGTCAACATCCAGGGCGAATCGGGCAGCGGCAAGGAGCGCGCCGCAAGGCTCATCCACGAACTGGG
CGCGCGCCGCGCCGGGCCGTTCATCGCCGTCAATTGCGGCGCCATTCCCGAAACCCTCGTCGAGTCGGAGTTCTTCGGCT
ACACCAAGGGCGCCTTCACCGGCGCGGACGCCGACCGCGAAGGCCATTTCCAGGCGGCGAAGGGCGGCACGCTGTTTCTC
GACGAAGTGGGCGATCTGCCGCTGTCGATGCAGGTGAAGCTGCTGCGCGCCATCCAGGAAAAGTCGGTGCGCCGCGTTGG
CGCGCGCAGCGAAGAGTCGACCGACATCCGGCTGATCAGCGCCACCCACCGCAATCTGAAGCAGATGGTCGATGACGGCC
GCTTCCGGCAGGACCTGTTCTACCGCCTCAACGTGCTCGAACTGCGCATGCCCAGCCTGCGCGAATGCCGCGAATCCATT
CCGCAGCTCGCGCAGACCCTGCTCGATCGCATCGCTGCGCCGGACCATGCGCATCCGGTGCTCACTCGCGCGGCGATCGA
CGCACTGTGCGCCTACCCCTTCCCGGGCAACGTGCGCGAGCTCGAAAACGTGCTCGAACGCGCCTACGCGCTGAGCGCCG
AGGCACAGATCGACGCCGCCGACCTCGGCCTGATGCCGGCCGACGACGACGCACCCGCCGATCCGGCCGGCGAATTGCCG
CTGCAGGACTACCTCGACCGCATGGAACGCGCAGCCATCGAAGACGCGCTGCGCAAGACCCGCTACAACCGGACCGCCGC
CGCCCGTCTGCTCGGCGTCACCTTCCGTTCGCTGCGCTACCGCCTGCAGCGTCTGGGCATCAATGAGTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (12-121)

3D structure

• AlphaFold DB: A0A1B3LS29

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.883	98.886	0.572
pilR	Acinetobacter baumannii strain A118	46.841	100	0.479