Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FORC37_RS13690 | Genome accession | NZ_CP016321 |
| Coordinates | 2787461..2788108 (+) | Length | 215 a.a. |
| NCBI ID | WP_039549897.1 | Uniprot ID | A0AAW4HH51 |
| Organism | Vibrio vulnificus strain FORC_037 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2782461..2793108
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC37_RS13675 (FORC37_2481) | - | 2782999..2784459 (-) | 1461 | WP_039549900.1 | MSHA biogenesis protein MshI | - |
| FORC37_RS13680 (FORC37_2482) | csrD | 2784472..2786469 (-) | 1998 | WP_026130604.1 | RNase E specificity factor CsrD | - |
| FORC37_RS13685 (FORC37_2483) | ssb | 2786622..2787161 (-) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| FORC37_RS13690 (FORC37_2484) | qstR | 2787461..2788108 (+) | 648 | WP_039549897.1 | response regulator transcription factor | Regulator |
| FORC37_RS13695 (FORC37_2485) | galU | 2788294..2789166 (+) | 873 | WP_017420065.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FORC37_RS13700 (FORC37_2486) | uvrA | 2789309..2792131 (+) | 2823 | WP_039542143.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24748.72 Da Isoelectric Point: 9.8565
>NTDB_id=186893 FORC37_RS13690 WP_039549897.1 2787461..2788108(+) (qstR) [Vibrio vulnificus strain FORC_037]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTMADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTMADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=186893 FORC37_RS13690 WP_039549897.1 2787461..2788108(+) (qstR) [Vibrio vulnificus strain FORC_037]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCTAAACAGATTCAAATGGAAATCCCTGTGATTACCCCAGCAACACTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAGGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATGGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTTTCCGTGAAGAATCGTGTCCAAGCCGCTGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCTAAACAGATTCAAATGGAAATCCCTGTGATTACCCCAGCAACACTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAGGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATGGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTTTCCGTGAAGAATCGTGTCCAAGCCGCTGCGTGGGCTGACCAAAATTTGA
TCTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
46.729 |
99.535 |
0.465 |