Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   A6J72_RS05910 Genome accession   NZ_CP020433
Coordinates   1190505..1190945 (-) Length   146 a.a.
NCBI ID   WP_041823295.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185505..1195945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS05895 (A6J72_05905) argR 1186748..1187188 (+) 441 WP_003075336.1 arginine repressor -
  A6J72_RS05900 (A6J72_05910) hexA 1187351..1189909 (+) 2559 WP_082311996.1 DNA mismatch repair protein MutS Machinery gene
  A6J72_RS05905 (A6J72_05915) - 1190050..1190508 (-) 459 WP_009569658.1 DUF3021 domain-containing protein -
  A6J72_RS05910 (A6J72_05920) brsR 1190505..1190945 (-) 441 WP_041823295.1 LytTR family DNA-binding domain-containing protein Regulator
  A6J72_RS05915 (A6J72_05925) hexB 1191187..1193133 (+) 1947 WP_082311997.1 DNA mismatch repair endonuclease MutL Machinery gene
  A6J72_RS05920 (A6J72_05930) - 1193279..1193788 (-) 510 WP_082311998.1 RDD family protein -
  A6J72_RS05925 (A6J72_05935) - 1193772..1194278 (-) 507 WP_082311999.1 helix-turn-helix domain-containing protein -
  A6J72_RS05930 (A6J72_05940) ruvA 1194448..1195041 (+) 594 WP_082312000.1 Holliday junction branch migration protein RuvA Machinery gene
  A6J72_RS05935 (A6J72_05945) - 1195051..1195605 (+) 555 WP_082312001.1 DNA-3-methyladenine glycosylase I -
  A6J72_RS10035 (A6J72_05950) - 1195610..1195783 (+) 174 Protein_1144 CPBP family intramembrane glutamate endopeptidase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16941.69 Da        Isoelectric Point: 7.3971

>NTDB_id=186426 A6J72_RS05910 WP_041823295.1 1190505..1190945(-) (brsR) [Streptococcus intermedius strain FDAARGOS_233]
MKVQMHIDEKFSEEKIIIEAPVLSDSVQQLLTFAQHIGKNKTIRAKKEEEIYLLNSTEIQRVYTENRQVWAETATDTYLL
GLPLYQVLELLPTDFLQISQSEIINIKHIDHLKLTGSGLIQIAMKNGQITYSSRRYLKVIKEKLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=186426 A6J72_RS05910 WP_041823295.1 1190505..1190945(-) (brsR) [Streptococcus intermedius strain FDAARGOS_233]
ATGAAAGTTCAAATGCATATTGACGAAAAATTTTCAGAAGAAAAAATCATTATTGAAGCACCTGTTTTGTCGGATTCCGT
TCAACAACTACTAACATTTGCTCAACATATCGGTAAAAATAAAACCATTCGAGCAAAAAAAGAGGAGGAAATTTACCTAC
TAAATAGCACGGAGATACAACGCGTCTATACTGAAAATCGGCAAGTTTGGGCCGAAACAGCAACAGACACTTATCTCTTA
GGGCTTCCACTTTATCAAGTTTTGGAATTGCTTCCCACTGATTTTCTACAGATTTCCCAATCTGAAATCATTAACATCAA
ACATATCGATCATCTGAAATTGACTGGTAGTGGTCTGATTCAGATTGCAATGAAAAACGGTCAGATAACTTATTCATCTC
GCCGTTATCTCAAAGTCATAAAGGAGAAATTACAGCTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37

Multiple sequence alignment