Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BA177_RS03250 Genome accession   NZ_CP016268
Coordinates   745393..745785 (+) Length   130 a.a.
NCBI ID   WP_068612782.1    Uniprot ID   -
Organism   Woeseia oceani strain XK5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 740393..750785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BA177_RS03220 (BA177_03220) ruvX 740975..741424 (-) 450 WP_068612766.1 Holliday junction resolvase RuvX -
  BA177_RS03225 (BA177_03225) - 741408..741971 (-) 564 WP_068612768.1 YqgE/AlgH family protein -
  BA177_RS03230 (BA177_03230) - 742014..742931 (-) 918 WP_197493295.1 energy transducer TonB -
  BA177_RS03235 (BA177_03235) - 742976..744043 (-) 1068 WP_068612773.1 FAD:protein FMN transferase -
  BA177_RS03240 (BA177_03240) gshB 744018..744965 (-) 948 WP_068612775.1 glutathione synthase -
  BA177_RS03250 (BA177_03250) pilG 745393..745785 (+) 393 WP_068612782.1 twitching motility response regulator PilG Regulator
  BA177_RS03255 (BA177_03255) - 745815..746180 (+) 366 WP_068612785.1 response regulator transcription factor -
  BA177_RS03260 (BA177_03260) - 746181..746744 (+) 564 WP_068612787.1 chemotaxis protein CheW -
  BA177_RS03265 (BA177_03265) - 746766..748766 (+) 2001 WP_231892480.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14381.60 Da        Isoelectric Point: 7.1342

>NTDB_id=186414 BA177_RS03250 WP_068612782.1 745393..745785(+) (pilG) [Woeseia oceani strain XK5]
MSNSATQGLNGLKILVIDDSKTIRRTAETLLSKEGCQVFTAVDGFDALSKIADHQPDLIFVDIMMPRLDGYQTCSLIKHN
KVFKDTPVIMLSSKDGLFDRARGRIVGSEQYLTKPFTRDELLGAISTQMA

Nucleotide


Download         Length: 393 bp        

>NTDB_id=186414 BA177_RS03250 WP_068612782.1 745393..745785(+) (pilG) [Woeseia oceani strain XK5]
GTGTCAAACAGTGCAACTCAAGGTCTGAACGGGCTGAAAATCCTGGTGATAGACGACAGCAAGACCATACGCCGCACGGC
AGAAACCCTGCTGTCCAAGGAGGGTTGCCAGGTGTTCACGGCGGTCGACGGTTTCGACGCATTGTCGAAAATTGCTGATC
ATCAGCCGGATCTGATTTTCGTGGACATCATGATGCCGAGACTTGATGGCTACCAGACTTGCTCGCTGATCAAACACAAC
AAAGTATTCAAAGATACGCCGGTCATCATGTTGTCCAGCAAGGATGGGCTGTTCGACAGGGCGCGCGGTCGTATCGTGGG
TTCGGAACAATACCTGACCAAGCCATTCACGCGCGACGAATTGCTGGGCGCAATTTCGACGCAGATGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.106

94.615

0.654
  vicR Streptococcus mutans UA159

41.88

90

0.377
  pilH Synechocystis sp. PCC 6803

42.857

86.154

0.369

Multiple sequence alignment