Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A9C19_RS06495 | Genome accession | NZ_CP016020 |
| Coordinates | 1370707..1371774 (+) | Length | 355 a.a. |
| NCBI ID | WP_099092742.1 | Uniprot ID | - |
| Organism | Bacillus weihaiensis strain Alg07 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1365707..1376774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9C19_RS06460 (A9C19_06320) | - | 1366312..1367427 (+) | 1116 | WP_072579182.1 | hypothetical protein | - |
| A9C19_RS06465 (A9C19_06325) | - | 1367442..1367750 (+) | 309 | WP_072579183.1 | MTH1187 family thiamine-binding protein | - |
| A9C19_RS06470 (A9C19_06330) | - | 1367954..1368127 (-) | 174 | WP_072579184.1 | DUF2759 domain-containing protein | - |
| A9C19_RS06475 (A9C19_06335) | - | 1368352..1368984 (+) | 633 | WP_072579185.1 | MBL fold metallo-hydrolase | - |
| A9C19_RS06480 (A9C19_06340) | - | 1369189..1369437 (-) | 249 | WP_026558763.1 | DUF2626 domain-containing protein | - |
| A9C19_RS06485 (A9C19_06345) | - | 1369771..1370151 (+) | 381 | WP_072579186.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| A9C19_RS06495 (A9C19_06355) | comGA | 1370707..1371774 (+) | 1068 | WP_099092742.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A9C19_RS06500 (A9C19_06360) | comGB | 1371764..1372798 (+) | 1035 | WP_072579187.1 | competence type IV pilus assembly protein ComGB | - |
| A9C19_RS06505 (A9C19_06365) | comGC | 1372810..1373124 (+) | 315 | WP_072579188.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A9C19_RS06510 (A9C19_06370) | comGD | 1373102..1373551 (+) | 450 | WP_072579189.1 | competence type IV pilus minor pilin ComGD | - |
| A9C19_RS21475 (A9C19_06375) | comGE | 1373538..1373867 (+) | 330 | WP_072579190.1 | competence type IV pilus minor pilin ComGE | - |
| A9C19_RS06520 (A9C19_06380) | comGF | 1373809..1374297 (+) | 489 | WP_072579191.1 | competence type IV pilus minor pilin ComGF | - |
| A9C19_RS06525 (A9C19_06385) | comGG | 1374287..1374676 (+) | 390 | WP_072579192.1 | competence type IV pilus minor pilin ComGG | - |
| A9C19_RS06530 (A9C19_06390) | - | 1374713..1375225 (+) | 513 | WP_072579193.1 | shikimate kinase | - |
| A9C19_RS06535 (A9C19_06395) | - | 1375263..1375469 (+) | 207 | WP_072581772.1 | YqzE family protein | - |
| A9C19_RS06540 (A9C19_06400) | - | 1375629..1375826 (+) | 198 | WP_083584306.1 | helix-turn-helix transcriptional regulator | - |
| A9C19_RS06545 (A9C19_06405) | - | 1375841..1376314 (+) | 474 | WP_083584307.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40635.12 Da Isoelectric Point: 8.0892
>NTDB_id=185304 A9C19_RS06495 WP_099092742.1 1370707..1371774(+) (comGA) [Bacillus weihaiensis strain Alg07]
MQAIEQLSERMIEEACSLRASDIHIIPKEYETLVQFRIDDDLLEKHYMKKELSERMISHLKFLASMDIGEKRRPQNGSLT
FATPNVKVNLRLSTLPTIHEESLVIRILPQEKIPHIDHLSLFPTTTKRLLSILNHSHGLMIFTGPTGSGKTTTLYSLIHY
AKQHFNRNIITLEDPVETKSEEVMQVQVNEKAGITYAAGLKAILRHDPDIIMVGEIRDHETAQIAIRASMTGHLVLSTMH
TRDAKGAIYRLLEFDVSLSEIEQTLVAVTAQRLVQLKCPFCEDACSPYCKKLRRKRRLSVYELLYGKNLTSVMKEAKGEV
AEYSYPTLKDVIKKGIALGYLYPNSYDRWVFKHEE
MQAIEQLSERMIEEACSLRASDIHIIPKEYETLVQFRIDDDLLEKHYMKKELSERMISHLKFLASMDIGEKRRPQNGSLT
FATPNVKVNLRLSTLPTIHEESLVIRILPQEKIPHIDHLSLFPTTTKRLLSILNHSHGLMIFTGPTGSGKTTTLYSLIHY
AKQHFNRNIITLEDPVETKSEEVMQVQVNEKAGITYAAGLKAILRHDPDIIMVGEIRDHETAQIAIRASMTGHLVLSTMH
TRDAKGAIYRLLEFDVSLSEIEQTLVAVTAQRLVQLKCPFCEDACSPYCKKLRRKRRLSVYELLYGKNLTSVMKEAKGEV
AEYSYPTLKDVIKKGIALGYLYPNSYDRWVFKHEE
Nucleotide
Download Length: 1068 bp
>NTDB_id=185304 A9C19_RS06495 WP_099092742.1 1370707..1371774(+) (comGA) [Bacillus weihaiensis strain Alg07]
TTGCAAGCAATTGAGCAGTTGAGTGAGAGAATGATAGAAGAAGCTTGTTCATTAAGAGCGTCAGACATACACATTATCCC
TAAAGAATATGAAACCTTAGTGCAATTCCGAATTGATGATGATTTATTAGAAAAACACTACATGAAAAAAGAACTCAGTG
AAAGAATGATTTCACATCTTAAATTTCTTGCATCAATGGATATTGGTGAGAAAAGAAGACCTCAAAATGGATCATTAACG
TTTGCAACACCCAATGTTAAGGTCAACCTTCGCTTATCAACCTTACCAACTATTCATGAAGAAAGCTTAGTCATTCGAAT
TCTACCTCAAGAGAAAATCCCACATATAGACCATCTATCTTTATTTCCAACAACAACTAAGAGATTACTCTCAATTTTGA
ATCATTCTCATGGGTTAATGATCTTTACAGGTCCTACTGGCTCGGGTAAAACCACAACTCTGTATTCACTCATCCACTAT
GCAAAGCAGCATTTTAATAGAAACATCATTACATTAGAAGACCCAGTTGAAACGAAGAGTGAAGAAGTAATGCAGGTACA
GGTTAATGAGAAAGCAGGTATTACCTATGCTGCAGGTCTAAAGGCAATTCTAAGACATGACCCTGACATTATTATGGTCG
GAGAAATTAGGGACCATGAGACAGCTCAAATTGCCATAAGAGCAAGTATGACAGGACACTTAGTTTTATCTACTATGCAT
ACAAGAGATGCGAAAGGAGCGATTTATCGGTTACTTGAATTTGACGTAAGCTTATCAGAAATTGAACAAACGTTAGTAGC
TGTTACAGCTCAACGTCTTGTACAGCTTAAATGCCCTTTTTGCGAAGATGCCTGTTCTCCCTATTGTAAAAAGTTAAGGA
GAAAAAGAAGGTTAAGTGTTTATGAATTATTATATGGGAAAAATTTAACATCTGTTATGAAAGAGGCGAAAGGAGAGGTT
GCAGAATATTCATATCCTACTTTAAAGGATGTGATAAAAAAAGGAATTGCATTAGGATATCTCTATCCAAACTCTTACGA
CCGTTGGGTGTTTAAACATGAGGAGTAA
TTGCAAGCAATTGAGCAGTTGAGTGAGAGAATGATAGAAGAAGCTTGTTCATTAAGAGCGTCAGACATACACATTATCCC
TAAAGAATATGAAACCTTAGTGCAATTCCGAATTGATGATGATTTATTAGAAAAACACTACATGAAAAAAGAACTCAGTG
AAAGAATGATTTCACATCTTAAATTTCTTGCATCAATGGATATTGGTGAGAAAAGAAGACCTCAAAATGGATCATTAACG
TTTGCAACACCCAATGTTAAGGTCAACCTTCGCTTATCAACCTTACCAACTATTCATGAAGAAAGCTTAGTCATTCGAAT
TCTACCTCAAGAGAAAATCCCACATATAGACCATCTATCTTTATTTCCAACAACAACTAAGAGATTACTCTCAATTTTGA
ATCATTCTCATGGGTTAATGATCTTTACAGGTCCTACTGGCTCGGGTAAAACCACAACTCTGTATTCACTCATCCACTAT
GCAAAGCAGCATTTTAATAGAAACATCATTACATTAGAAGACCCAGTTGAAACGAAGAGTGAAGAAGTAATGCAGGTACA
GGTTAATGAGAAAGCAGGTATTACCTATGCTGCAGGTCTAAAGGCAATTCTAAGACATGACCCTGACATTATTATGGTCG
GAGAAATTAGGGACCATGAGACAGCTCAAATTGCCATAAGAGCAAGTATGACAGGACACTTAGTTTTATCTACTATGCAT
ACAAGAGATGCGAAAGGAGCGATTTATCGGTTACTTGAATTTGACGTAAGCTTATCAGAAATTGAACAAACGTTAGTAGC
TGTTACAGCTCAACGTCTTGTACAGCTTAAATGCCCTTTTTGCGAAGATGCCTGTTCTCCCTATTGTAAAAAGTTAAGGA
GAAAAAGAAGGTTAAGTGTTTATGAATTATTATATGGGAAAAATTTAACATCTGTTATGAAAGAGGCGAAAGGAGAGGTT
GCAGAATATTCATATCCTACTTTAAAGGATGTGATAAAAAAAGGAATTGCATTAGGATATCTCTATCCAAACTCTTACGA
CCGTTGGGTGTTTAAACATGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
66.573 |
100 |
0.668 |
| pilB | Glaesserella parasuis strain SC1401 |
39.881 |
94.648 |
0.377 |
| pilB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
37.791 |
96.901 |
0.366 |