Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FORC59_RS08730 Genome accession   NZ_CP020354
Coordinates   1751714..1752703 (-) Length   329 a.a.
NCBI ID   WP_061741473.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC59     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1746714..1757703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC59_RS08715 (FORC59_1620) acsA 1747915..1749621 (-) 1707 WP_000862083.1 acetate--CoA ligase -
  FORC59_RS08720 (FORC59_1621) - 1749790..1750422 (+) 633 WP_001015996.1 hypothetical protein -
  FORC59_RS08725 (FORC59_1622) - 1750447..1751616 (+) 1170 WP_049311764.1 acetoin utilization protein AcuC -
  FORC59_RS08730 (FORC59_1623) ccpA 1751714..1752703 (-) 990 WP_061741473.1 catabolite control protein A Regulator
  FORC59_RS08735 - 1752776..1752889 (-) 114 WP_001803513.1 hypothetical protein -
  FORC59_RS08740 (FORC59_1624) - 1753243..1754334 (-) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  FORC59_RS08745 - 1754795..1754878 (-) 84 WP_031789490.1 hypothetical protein -
  FORC59_RS08750 (FORC59_1625) - 1755034..1756398 (-) 1365 WP_000193943.1 hypothetical protein -
  FORC59_RS08755 (FORC59_1626) - 1756472..1756963 (-) 492 WP_000383814.1 DUF948 domain-containing protein -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36020.21 Da        Isoelectric Point: 5.3126

>NTDB_id=185261 FORC59_RS08730 WP_061741473.1 1751714..1752703(-) (ccpA) [Staphylococcus aureus strain FORC59]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEPSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=185261 FORC59_RS08730 WP_061741473.1 1751714..1752703(-) (ccpA) [Staphylococcus aureus strain FORC59]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAAGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACC
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGTCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGTAATCTTCCAGATGCTATA
TTATGTATCAGTGACGAAGAAGCTATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGTTTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.879

100

0.48
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Streptococcus pneumoniae D39

46.201

100

0.462

Multiple sequence alignment