Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   FORC59_RS05990 Genome accession   NZ_CP020354
Coordinates   1183148..1185208 (+) Length   686 a.a.
NCBI ID   WP_001151501.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC59     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1178148..1190208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC59_RS05965 (FORC59_1101) rpe 1178619..1179263 (+) 645 WP_000164332.1 ribulose-phosphate 3-epimerase -
  FORC59_RS05970 (FORC59_1102) - 1179270..1179911 (+) 642 WP_000547905.1 thiamine diphosphokinase -
  FORC59_RS05975 (FORC59_1103) rpmB 1180292..1180480 (-) 189 WP_000517908.1 50S ribosomal protein L28 -
  FORC59_RS05980 (FORC59_1104) - 1180923..1181297 (+) 375 WP_000171418.1 Asp23/Gls24 family envelope stress response protein -
  FORC59_RS05985 (FORC59_1105) fakA 1181312..1182958 (+) 1647 WP_000623903.1 fatty acid kinase catalytic subunit FakA -
  FORC59_RS05990 (FORC59_1106) recG 1183148..1185208 (+) 2061 WP_001151501.1 ATP-dependent DNA helicase RecG Machinery gene
  FORC59_RS05995 (FORC59_1107) fapR 1185411..1185983 (+) 573 WP_001548538.1 transcription factor FapR -
  FORC59_RS06000 (FORC59_1108) plsX 1185988..1186974 (+) 987 WP_000239742.1 phosphate acyltransferase PlsX -
  FORC59_RS06005 (FORC59_1109) fabD 1186967..1187893 (+) 927 WP_000047347.1 ACP S-malonyltransferase -
  FORC59_RS06010 (FORC59_1110) fabG 1187886..1188620 (+) 735 WP_000167269.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  FORC59_RS06020 (FORC59_1112) - 1189054..1189287 (+) 234 WP_000426914.1 acyl carrier protein -
  FORC59_RS06025 (FORC59_1113) rnc 1189403..1190134 (+) 732 WP_000043237.1 ribonuclease III -

Sequence


Protein


Download         Length: 686 a.a.        Molecular weight: 78342.91 Da        Isoelectric Point: 6.2483

>NTDB_id=185227 FORC59_RS05990 WP_001151501.1 1183148..1185208(+) (recG) [Staphylococcus aureus strain FORC59]
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGR
NKSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQTQENADVQLEPVYRIKEG
IKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKS
SDEAIEIDYDIDQVKSFINRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMV
PTEILAEQHAESLMALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVN
QRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDKVLMQMTSELKKGRQAYVIC
PLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYD
ADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVAN
LVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD

Nucleotide


Download         Length: 2061 bp        

>NTDB_id=185227 FORC59_RS05990 WP_001151501.1 1183148..1185208(+) (recG) [Staphylococcus aureus strain FORC59]
TTGGCTAAAGTAAACTTAATAGAAAGTCCATATTCTCTTTTACAATTAAAAGGTATAGGTCCTAAGAAAATAGAAGTATT
GCAACAACTAAATATTCATACAGTGGAAGATCTTGTTCTTTATTTGCCAACTAGATATGAAGATAATACAGTGATTGATT
TGAATCAAGCAGAAGATCAATCTAACGTTACGATAGAAGGACAAGTATATACAGCTCCAGTAGTTGCATTTTTTGGAAGA
AATAAATCAAAATTAACCGTTCATTTAATGGTAAATAATATTGCTGTCAAATGTATTTTTTTCAATCAACCGTATTTAAA
AAAGAAAATCGAATTAAATCAAACTATAACTGTTAAAGGTAAGTGGAATAGGGTTAAACAGGAAATTACTGGTAATAGGG
TTTTCTTTAATTCACAAGGGACACAAACTCAAGAAAACGCAGATGTTCAATTAGAACCAGTCTATCGTATTAAGGAAGGT
ATTAAACAAAAGCAAATACGAGACCAAATTAGACAAGCGTTAAATGATGTGACAATTCATGAATGGTTAACTGATGAACT
AAGAGAAAAATATAAATTAGAGACCTTGGACTTTACTTTGAACACATTACATCATCCTAAAAGTAAAGAGGATTTATTAC
GTGCTCGTAGAACCTATGCATTTACTGAACTGTTTTTATTCGAATTACGTATGCAATGGCTAAATAGATTAGAAAAGTCA
TCTGACGAAGCAATTGAAATTGATTATGACATAGACCAAGTTAAATCATTTATTAATCGTTTACCTTTTGAACTAACTGA
AGCACAGAAATCCAGTGTTAATGAAATTTTTAGAGATTTAAAAGCACCAATACGTATGCATCGATTACTTCAAGGTGATG
TAGGTTCAGGAAAAACAGTAGTTGCTGCAATTTGTATGTATGCGTTAAAAACGGCTGGTTATCAATCAGCATTGATGGTA
CCAACTGAAATTTTAGCAGAGCAACATGCTGAAAGTTTAATGGCTTTATTTGGAGATTCTATGAACGTTGCATTGTTAAC
TGGGTCAGTAAAAGGTAAGAAACGAAAGATACTTTTAGAACAACTTGAAAATGGTACGATTGATTGTTTAATTGGAACCC
ATGCTTTGATTCAAGATGATGTGATTTTCCATAATGTTGGTTTAGTAATTACAGATGAACAACATCGATTTGGTGTGAAT
CAACGCCAGCTTTTAAGAGAAAAAGGTGCAATGACGAATGTGTTATTTATGACAGCAACGCCGATACCAAGAACACTAGC
AATATCAGTTTTTGGTGAGATGGATGTGTCTTCAATTAAACAATTACCAAAAGGTCGTAAACCTATTATTACTACTTGGG
CAAAGCATGAGCAATACGATAAAGTTTTGATGCAAATGACCTCAGAGTTGAAAAAAGGTCGTCAAGCATATGTCATTTGC
CCGCTAATAGAAAGTTCTGAGCATCTCGAAGATGTTCAAAATGTTGTCGCATTGTACGAGTCTTTACAACAGTATTATGG
TGTTTCCCGTGTAGGGTTATTGCATGGTAAGTTATCTGCCGATGAAAAAGATGAGGTCATGCAAAAGTTTAGTAATCATG
AGATAGATGTTTTAGTTTCTACTACTGTTGTTGAAGTAGGTGTTAATGTACCGAATGCAACTTTTATGATGATTTATGAT
GCGGATCGCTTTGGATTATCAACTTTACATCAGTTACGCGGTCGTGTAGGTAGAAGTGACCAGCAAAGTTACTGTGTTTT
AATTGCATCCCCTAAAACAGAAACAGGAATTGAAAGAATGACAATTATGACACAAACAACGGATGGATTTGAATTGAGTG
AACGAGACTTAGAAATGCGTGGTCCTGGAGATTTCTTTGGTGTTAAACAAAGTGGGTTGCCAGATTTCTTAGTTGCCAAT
TTAGTTGAAGATTATCGTATGTTAGAAGTTGCTCGTGATGAAGCAGCTGAACTTATTCAATCTGGCGTATTCTTTGAAAA
TACGTATCAACATTTACGTCATTTTGTTGAAGAAAATTTATTACATCGCAGTTTTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

53.073

97.23

0.516

  recG/mmsA Streptococcus pneumoniae R6

50.388

94.023

0.474

  recG/mmsA Streptococcus pneumoniae R36A

50.388

94.023

0.474

  recG Neisseria meningitidis strain C311

39.82

97.376

0.388


Multiple sequence alignment