Detailed information NTG0184966

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: THL1_RS04955
• Genome accession: NZ_CP015992
• Coordinates: 1071935..1073536 (-)
• Length: 533 a.a.
• NCBI ID: WP_069082224.1
• Uniprot ID: A0A1B3E1Y6
• Organism: Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1066935..1078536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
THL1_RS04945 (THL1_991)	-	1070113..1070529 (+)	417	WP_069082222.1	type IV pilin protein	-
THL1_RS04950 (THL1_992)	pilR	1070595..1071932 (-)	1338	WP_069082223.1	sigma-54-dependent transcriptional regulator	Regulator
THL1_RS04955 (THL1_993)	pilS	1071935..1073536 (-)	1602	WP_069082224.1	sensor histidine kinase	Regulator
THL1_RS04960 (THL1_994)	-	1073526..1073762 (-)	237	WP_069082225.1	PP0621 family protein	-
THL1_RS04965 (THL1_995)	-	1073934..1075565 (+)	1632	WP_069086411.1	NAD+ synthase	-
THL1_RS04970 (THL1_996)	-	1075865..1077004 (-)	1140	WP_069082226.1	IS481 family transposase	-
THL1_RS04975 (THL1_997)	-	1077274..1078293 (-)	1020	WP_069082227.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 533 a.a.
• Molecular weight: 58984.92 Da
• Isoelectric Point: 7.7796

>NTDB_id=184966 THL1_RS04955 WP_069082224.1 1071935..1073536(-) (pilS) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
MSADSLSLPSALSAQGRRIFRLYSLYRLLIGVALVVLISSELDDELLDLARPELFRNASWFYLILNTLIAALVPRPRSMV
QVFSLAVVDVLLLSCLFFAGGGTPSGIANLMVVSVAISNILLRGRIGLLVAAVATIGLIYLTFYLSLSHPQAASQFVQAG
GFGALCFAAALFIQGLSRRLQLSETLSEQRAADVANLEALNAQILERMRTGILVLDPRNQILLANNGAQTLLGKDNLMGR
PLDTQCRELLASLQQWLANPTLRPQSIQAFADGPTLQPSFVHLQRGNEKNTLVFLEDISQIAQQAQQLKLASLGRLTAGI
AHEIRNPLGAISHAAQLLQESEELQGPDRRLAQIIQDHSRRMNLVIENVLQLSRRRQSEPQLLDLKYWLTRFASEFRSTS
GANQTLHLTTLGSTLQTRMDPHQLTQVLTNLVQNGLRYSAKQHSQGQVWLKLFRDPESDLPVLEVEDDGEGVAPEQVHNI
FEPFFTTESKGTGLGLYISRELCESNQARLDYKPREPVGSCFRITFAHPRKLS

Nucleotide

• Length: 1602 bp

>NTDB_id=184966 THL1_RS04955 WP_069082224.1 1071935..1073536(-) (pilS) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
GTGAGCGCTGACAGCCTGTCCCTACCCAGTGCACTCAGCGCCCAGGGACGCCGCATCTTCCGCCTGTACAGCCTGTACCG
GCTGCTGATCGGCGTTGCACTGGTGGTACTGATCTCCAGCGAGCTGGATGACGAATTACTCGATCTGGCACGACCGGAAC
TGTTCCGCAACGCCAGCTGGTTCTACCTGATCCTCAATACCCTGATCGCCGCGCTGGTCCCCCGCCCCCGAAGCATGGTG
CAGGTATTCAGCCTGGCAGTGGTCGATGTGCTGCTGCTGTCCTGCCTGTTCTTCGCGGGAGGAGGCACGCCCAGCGGCAT
CGCCAACCTCATGGTGGTGTCGGTGGCCATCTCCAACATCCTGTTGCGGGGCCGCATCGGATTGCTGGTGGCGGCTGTGG
CGACCATCGGGCTGATCTACCTGACCTTCTACCTCAGCCTCAGCCATCCGCAGGCTGCCAGCCAGTTCGTCCAGGCCGGC
GGCTTTGGTGCGCTGTGTTTTGCCGCCGCGCTGTTCATCCAGGGCCTGAGCCGCCGCCTGCAACTCAGCGAAACCCTCTC
CGAGCAACGCGCCGCCGATGTCGCCAACCTGGAGGCGCTCAACGCGCAGATTCTCGAACGCATGCGCACCGGCATCCTGG
TGCTCGACCCGCGGAACCAGATCCTGCTCGCCAACAATGGCGCCCAGACACTGCTGGGCAAGGACAACCTGATGGGCCGG
CCACTGGACACCCAGTGCCGCGAACTGCTGGCAAGCCTTCAGCAGTGGCTGGCCAACCCGACCTTACGCCCCCAGAGCAT
CCAGGCATTTGCCGACGGCCCGACCTTGCAGCCGAGCTTCGTCCACCTGCAGCGGGGCAACGAAAAGAACACCCTGGTGT
TCCTCGAAGACATCTCCCAGATCGCCCAGCAGGCCCAGCAACTCAAGCTTGCCTCCCTGGGCCGCCTGACGGCGGGCATC
GCCCACGAAATCCGCAACCCCTTGGGCGCCATCAGCCACGCCGCCCAGCTCTTGCAGGAATCGGAAGAACTCCAGGGCCC
CGATAGACGCCTGGCGCAGATCATCCAGGATCACTCGCGGCGCATGAACCTGGTCATCGAAAACGTCCTGCAACTGTCCC
GCCGCCGCCAGTCGGAACCGCAACTGCTGGACCTCAAGTACTGGCTGACCCGCTTCGCCAGCGAGTTCCGCAGCACCTCC
GGCGCCAACCAGACCCTGCACCTGACCACCCTTGGCAGCACCCTGCAAACCCGCATGGACCCGCACCAACTGACCCAGGT
GCTGACCAACCTGGTGCAGAACGGCCTGCGCTACAGCGCCAAGCAGCACAGTCAGGGCCAGGTCTGGCTCAAGCTGTTCC
GCGACCCGGAAAGCGACCTGCCAGTGCTGGAGGTCGAGGACGATGGCGAAGGCGTAGCGCCCGAGCAGGTGCACAACATC
TTCGAGCCCTTCTTCACCACGGAGAGCAAGGGCACTGGCCTGGGCCTGTACATTTCCCGCGAACTCTGCGAAAGCAATCA
GGCGCGACTCGACTACAAACCGCGCGAGCCAGTTGGCAGCTGCTTCCGCATCACCTTCGCACACCCGCGCAAACTGAGCT
GA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (312-376)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (420-526)

3D structure

• AlphaFold DB: A0A1B3E1Y6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	66.281	97.373	0.645