Detailed information NTG0184965

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: THL1_RS04950
• Genome accession: NZ_CP015992
• Coordinates: 1070595..1071932 (-)
• Length: 445 a.a.
• NCBI ID: WP_069082223.1
• Uniprot ID: A0A1B3E204
• Organism: Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1065595..1076932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
THL1_RS04935 (THL1_989)	-	1066162..1066674 (+)	513	WP_083245822.1	PilX N-terminal domain-containing pilus assembly protein	-
THL1_RS04940 (THL1_990)	-	1066691..1070116 (+)	3426	WP_069082221.1	pilus assembly protein	-
THL1_RS04945 (THL1_991)	-	1070113..1070529 (+)	417	WP_069082222.1	type IV pilin protein	-
THL1_RS04950 (THL1_992)	pilR	1070595..1071932 (-)	1338	WP_069082223.1	sigma-54-dependent transcriptional regulator	Regulator
THL1_RS04955 (THL1_993)	pilS	1071935..1073536 (-)	1602	WP_069082224.1	sensor histidine kinase	Regulator
THL1_RS04960 (THL1_994)	-	1073526..1073762 (-)	237	WP_069082225.1	PP0621 family protein	-
THL1_RS04965 (THL1_995)	-	1073934..1075565 (+)	1632	WP_069086411.1	NAD+ synthase	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49543.86 Da
• Isoelectric Point: 5.4584

>NTDB_id=184965 THL1_RS04950 WP_069082223.1 1070595..1071932(-) (pilR) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNIKEAREWLAREPFDLCLTDMRLPDGTGLELVQYIQQRHPMVPVAM
ITAYGSLDTAVNALKAGAFDFVTKPVDLGRLRELVNTALRLSTPEDGEVPVDGRLLGTSPPMTALRKQIQKLARSQAPVY
ISGESGSGKELVARLIHDQGPRAERPFVPVNCGAIPSELMESEFFGHKKGSFTGAVEDKQGLFQAANGGTLFLDEVADLP
LAMQVKLLRAIQEKAVRAVGGQLEGGVDVRILSATHKDLAAEVAAGRFRQDLYYRLNVIELSVPPLRERREDIPLLTETM
LKRLTQQSGLPAASLSPEALDKLKCYRFPGNVRELENMLERAYTLCEDDQIQARDLRLADASGAAEGGEANLAQIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=184965 THL1_RS04950 WP_069082223.1 1070595..1071932(-) (pilR) [Pseudomonas sp. TCU-HL1 isolate Hualien Taiwan]
ATGACCCGACAGAGAGCCCTGATCGTCGACGACGAGCCCGATATCCGCGAACTGCTGGAAATCACCCTCGGACGGATGAA
GCTCGACACCCGCAGCGCCCGCAACATAAAGGAGGCCCGCGAGTGGCTGGCACGGGAACCCTTCGACCTGTGCCTGACCG
ACATGCGCCTGCCCGATGGGACCGGGCTGGAACTGGTGCAGTACATCCAGCAGCGCCACCCCATGGTCCCGGTGGCGATG
ATCACCGCCTATGGCAGCCTCGATACCGCGGTGAACGCCCTCAAGGCCGGCGCCTTCGATTTCGTCACCAAGCCGGTCGA
TCTCGGCCGTCTGCGGGAACTGGTCAACACTGCCCTGCGCCTGAGCACCCCGGAAGACGGCGAAGTCCCAGTGGACGGCC
GCCTGCTGGGCACTTCGCCGCCCATGACCGCCCTGCGCAAGCAGATCCAGAAGCTCGCCCGCAGCCAGGCGCCGGTGTAC
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCGCGACTGATCCATGATCAGGGCCCGCGTGCCGAGCGTCCCTT
CGTGCCGGTCAACTGTGGCGCCATCCCGTCGGAGCTCATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCACCG
GCGCCGTGGAAGACAAACAGGGTCTGTTCCAGGCCGCCAATGGCGGCACCCTCTTCCTCGACGAAGTGGCCGACCTGCCG
CTGGCGATGCAGGTGAAACTGTTGCGCGCCATCCAGGAGAAGGCCGTGCGCGCGGTGGGCGGCCAGCTGGAAGGGGGCGT
GGACGTGCGCATCCTTAGCGCTACCCACAAGGACCTCGCTGCCGAAGTCGCGGCAGGCCGCTTCCGCCAGGACCTCTATT
ACCGCCTCAATGTCATCGAACTCAGCGTGCCGCCGCTGCGCGAGCGCCGCGAAGACATCCCGCTGCTGACGGAAACCATG
CTCAAGCGTCTGACCCAGCAGAGCGGGCTGCCAGCGGCAAGCCTCTCCCCCGAAGCGCTGGACAAGCTCAAGTGCTACCG
CTTCCCCGGCAACGTCCGGGAGCTGGAGAACATGCTCGAGCGCGCCTACACCCTGTGCGAGGACGACCAGATCCAGGCAC
GCGACCTGCGCCTGGCCGATGCCAGCGGCGCGGCAGAAGGCGGCGAGGCCAACCTGGCGCAGATCGACAACCTGGAAGAC
TATCTGGAAGACATCGAACGCAAGCTAATCATGCAGGCCCTCGAAGAAACCCGCTGGAACCGCACCGCCGCGGCACAGCG
CCTGGGCCTGACCTTCCGCTCGATGCGCTATCGCCTGAAGAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A1B3E204

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	87.191	100	0.872
pilR	Acinetobacter baumannii strain A118	49.455	100	0.51