Detailed information NTG0184897

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: B4U62_RS16020
• Genome accession: NZ_CP020102
• Coordinates: 3044182..3045186 (-)
• Length: 334 a.a.
• NCBI ID: WP_003229285.1
• Uniprot ID: P25144
• Organism: Bacillus subtilis strain NCIB 3610
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3039182..3050186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4U62_RS15995 (B4U62_15995)	acuA	3040109..3040741 (+)	633	WP_003229296.1	acetoin utilization protein acetyltransferase AcuA	-
B4U62_RS16000 (B4U62_16000)	acuB	3040768..3041412 (+)	645	WP_003229294.1	acetoin utilization AcuB family protein	-
B4U62_RS16005 (B4U62_16005)	acuC	3041409..3042572 (+)	1164	WP_004398517.1	acetoin utilization protein AcuC	-
B4U62_RS16010 (B4U62_16010)	motS	3042583..3043311 (-)	729	WP_003229290.1	flagellar motor protein MotS	-
B4U62_RS16015 (B4U62_16015)	motP	3043301..3044119 (-)	819	WP_004398692.1	flagellar motor protein MotP	-
B4U62_RS16020 (B4U62_16020)	ccpA	3044182..3045186 (-)	1005	WP_003229285.1	catabolite control protein A	Regulator
B4U62_RS16025 (B4U62_16025)	aroX	3045462..3046538 (-)	1077	WP_003223454.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
B4U62_RS16030 (B4U62_16030)	ytxJ	3046774..3047100 (-)	327	WP_003229280.1	bacillithiol system redox-active protein YtxJ	-
B4U62_RS16035 (B4U62_16035)	ytxH	3047124..3047579 (-)	456	WP_004398549.1	YtxH domain-containing protein	-
B4U62_RS16040 (B4U62_16040)	ytxG	3047610..3048032 (-)	423	WP_003229276.1	DUF948 domain-containing protein	-
B4U62_RS16045 (B4U62_16045)	murC	3048194..3049492 (-)	1299	WP_003229274.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36940.34 Da
• Isoelectric Point: 5.0249

>NTDB_id=184897 B4U62_RS16020 WP_003229285.1 3044182..3045186(-) (ccpA) [Bacillus subtilis strain NCIB 3610]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=184897 B4U62_RS16020 WP_003229285.1 3044182..3045186(-) (ccpA) [Bacillus subtilis strain NCIB 3610]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

3D structure

• PDB: 1ZVV
• PDB: 2FEP
• PDB: 3OQM
• PDB: 3OQN
• PDB: 3OQO

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.545	98.802	0.539
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.636	98.802	0.53
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503