Detailed information NTG0182707

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: B4W62_RS05630
• Genome accession: NZ_CP019977
• Coordinates: 1112094..1114067 (+)
• Length: 657 a.a.
• NCBI ID: WP_058914647.1
• Uniprot ID: -
• Organism: Campylobacter coli strain aerotolerant OR12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1107094..1119067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4W62_RS05600	flgH	1107282..1107980 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
B4W62_RS05605	ispG	1108064..1109137 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
B4W62_RS05610	-	1109197..1111035 (-)	1839	WP_002787399.1	primosomal protein N'	-
B4W62_RS05615	Cj0683	1111032..1111478 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
B4W62_RS05620	-	1111475..1111720 (-)	246	WP_002776428.1	hypothetical protein	-
B4W62_RS05625	-	1111710..1111940 (-)	231	WP_002776426.1	hypothetical protein	-
B4W62_RS05630	uvrB	1112094..1114067 (+)	1974	WP_058914647.1	excinuclease ABC subunit UvrB	Machinery gene
B4W62_RS05635	-	1114102..1115525 (-)	1424	Protein_1094	anaerobic C4-dicarboxylate transporter	-
B4W62_RS05640	-	1115712..1116962 (-)	1251	WP_002776420.1	RNA polymerase factor sigma-54	-
B4W62_RS05645	lptB	1116962..1117690 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
B4W62_RS05650	tsaE	1117683..1118090 (-)	408	WP_002776418.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
B4W62_RS05655	-	1118087..1118332 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76044.50 Da
• Isoelectric Point: 6.7343

>NTDB_id=182707 B4W62_RS05630 WP_058914647.1 1112094..1114067(+) (uvrB) [Campylobacter coli strain aerotolerant OR12]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYKDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFISATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=182707 B4W62_RS05630 WP_058914647.1 1112094..1114067(+) (uvrB) [Campylobacter coli strain aerotolerant OR12]
ATGTTAGAACTTACAAGCGATTTTAAGCCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCGACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATAAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTATTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

• UvrB/uvrC motif (UVR) (623-656)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae D39	50.152	99.848	0.501
uvrB	Streptococcus pneumoniae TIGR4	50.152	99.848	0.501