Detailed information NTG0182700

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: A9C11_RS09620
• Genome accession: NZ_CP015878
• Coordinates: 2150761..2152968 (+)
• Length: 735 a.a.
• NCBI ID: WP_208858274.1
• Uniprot ID: -
• Organism: Pseudomonas citronellolis strain SJTE-3
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2145761..2157968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9C11_RS09600 (A9C11_09595)	lolD	2146135..2146818 (+)	684	WP_064582523.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
A9C11_RS09605 (A9C11_09600)	-	2146835..2148085 (+)	1251	WP_064582524.1	lipoprotein-releasing ABC transporter permease subunit	-
A9C11_RS09610 (A9C11_09605)	-	2148622..2149707 (+)	1086	WP_082936710.1	IS110 family transposase	-
A9C11_RS09615 (A9C11_09610)	-	2150094..2150624 (-)	531	WP_064582526.1	DUF2062 domain-containing protein	-
A9C11_RS09620 (A9C11_09615)	comA	2150761..2152968 (+)	2208	WP_208858274.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A9C11_RS09625 (A9C11_09620)	exbB	2153041..2153676 (+)	636	WP_009621398.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
A9C11_RS09630 (A9C11_09625)	-	2153673..2154119 (+)	447	WP_058071023.1	ExbD/TolR family protein	-
A9C11_RS09635 (A9C11_09630)	lpxK	2154119..2155117 (+)	999	WP_064582528.1	tetraacyldisaccharide 4'-kinase	-
A9C11_RS09640 (A9C11_09635)	-	2155158..2155343 (+)	186	WP_009621404.1	Trm112 family protein	-
A9C11_RS09645 (A9C11_09640)	kdsB	2155364..2156128 (+)	765	WP_058488932.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
A9C11_RS09650 (A9C11_09645)	-	2156128..2156589 (+)	462	WP_043316169.1	low molecular weight protein-tyrosine-phosphatase	-
A9C11_RS09655 (A9C11_09650)	murB	2156586..2157605 (+)	1020	WP_064582529.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 78532.74 Da
• Isoelectric Point: 7.9031

>NTDB_id=182700 A9C11_RS09620 WP_208858274.1 2150761..2152968(+) (comA) [Pseudomonas citronellolis strain SJTE-3]
MMALACGLVLLRFLPQLPPLAALLPLVGMALLCLYRRHHAVALFLLGFAWACLFAHDSWEGRLAPELDGQTLWLEGQVAG
LPAAADGIVRFELEDVQARLDLPGRIRVSWYGGPEVRAGERWRLAVTLRRPHGLANDFGFDYEAWLAADGIGATGSVKDG
RRLAEATGPMAWREAWKDRLLAVDARGRNAYLVALVLGDGSGLGRDDWDMLQDTGTLHLMVISGSHISLLGGLLYALVAG
LARLGAWPARVPWLPCACAVALAGAWGYGWIAGLQVPALRACLMLSMVLLWRLHFRRQGVWLPLLGALLVVLLVDPLVSL
TPGFWLSFAAVALLVYGFAGRLGRGAGWLAWGRAQWLMALGLAPVLLALGLPLSPAGALANLIAVPCVELLVVPLALVGS
LLLWLPAVGEGLLWLAGGVLDVLLGLLGRLSLYSPAWHPMAPPAWSIALALFGALLCLAPAGLPLRPLGLALLLPMFWPH
STTPPHGHAEVRVLDVGQGLSVLIRTRQHTWLYDAGPRRGDFDLGEVAVLPTLRGLGIERLDMLLLSHADNDHAGGARSV
AAAVPVARIISGEPGRLPDSLPAGPCGNEAWQLDGVRFSTWQWPDATDSNGRSCVLYVEAGGESLLLTGDLPAAGEAAWL
ASHPGLGADWLLAGHHGSRSASSAAFVRQLAPRAALVSRSRHNAHGHPSSEVLQRFAEQGTKVHDVAREGALRLLLGQRG
TLRGVRENAGFWREK

Nucleotide

• Length: 2208 bp

>NTDB_id=182700 A9C11_RS09620 WP_208858274.1 2150761..2152968(+) (comA) [Pseudomonas citronellolis strain SJTE-3]
ATGATGGCGCTGGCCTGCGGCCTGGTGCTGCTGCGTTTCCTGCCCCAGTTGCCACCCCTGGCAGCCTTGCTGCCATTGGT
CGGAATGGCGCTGCTGTGCCTGTATCGGCGACATCACGCGGTGGCGCTCTTCCTGCTCGGCTTCGCCTGGGCCTGCCTGT
TCGCCCATGACTCGTGGGAAGGGCGCCTGGCTCCCGAACTGGACGGGCAGACGCTGTGGCTGGAAGGGCAGGTTGCCGGC
CTGCCGGCTGCCGCGGATGGCATCGTCCGCTTCGAGCTGGAGGACGTCCAGGCGCGCCTGGACCTGCCCGGGCGCATCCG
CGTGTCCTGGTATGGCGGCCCGGAGGTGCGGGCCGGGGAACGCTGGCGCCTGGCGGTCACCCTGCGCCGCCCCCATGGCC
TGGCCAACGATTTCGGCTTCGACTATGAAGCCTGGCTGGCGGCCGACGGCATAGGCGCCACCGGCAGCGTCAAGGATGGC
CGGCGCCTGGCCGAGGCCACGGGACCGATGGCTTGGCGCGAAGCCTGGAAGGACCGGCTGCTGGCGGTGGATGCCCGGGG
ACGCAACGCCTACCTGGTGGCCCTGGTCCTAGGCGACGGCAGCGGCCTGGGCCGGGACGACTGGGACATGCTGCAGGACA
CCGGCACCCTGCACCTGATGGTGATCTCCGGCTCGCACATCTCCCTGCTGGGCGGCTTGCTCTACGCCCTGGTGGCGGGT
CTGGCGCGGCTGGGAGCCTGGCCGGCGCGCGTGCCCTGGCTGCCCTGCGCCTGTGCCGTTGCACTGGCTGGCGCCTGGGG
CTATGGCTGGATCGCCGGGCTGCAGGTGCCGGCATTGCGCGCCTGCCTGATGCTCAGCATGGTGCTGCTGTGGCGCCTGC
ACTTTCGTCGCCAGGGCGTCTGGCTGCCGCTGCTCGGTGCTCTGCTGGTGGTGCTGCTGGTCGATCCGCTGGTCAGCCTG
ACGCCCGGCTTCTGGCTGTCCTTCGCCGCCGTGGCGCTGCTCGTCTACGGCTTCGCCGGGCGCCTGGGGCGGGGGGCCGG
CTGGCTGGCCTGGGGGCGCGCGCAGTGGCTCATGGCTCTCGGCCTGGCACCGGTGTTGCTGGCCCTGGGCCTGCCGCTGA
GTCCCGCCGGCGCGCTGGCGAACCTGATCGCGGTGCCCTGTGTCGAGTTGCTGGTGGTGCCCCTGGCGCTGGTCGGCAGC
CTGCTGCTGTGGCTGCCGGCGGTGGGCGAGGGGCTGCTATGGCTGGCCGGTGGCGTGCTCGACGTGCTGCTGGGCCTGCT
CGGGCGCCTGTCGCTGTATTCCCCGGCCTGGCATCCCATGGCACCGCCGGCCTGGAGCATCGCCCTGGCCCTGTTCGGCG
CGCTGCTGTGCCTGGCGCCGGCCGGGCTGCCGCTGCGCCCGCTGGGCCTGGCGTTGCTGTTGCCGATGTTCTGGCCGCAT
TCCACTACGCCGCCCCATGGCCATGCCGAAGTGCGGGTGCTGGACGTGGGCCAGGGGCTGTCCGTGCTGATCCGCACCCG
CCAGCACACCTGGCTGTACGACGCCGGACCGCGCCGGGGCGATTTCGACCTCGGCGAGGTGGCGGTGCTGCCGACTCTCC
GTGGCCTGGGCATCGAGCGCCTGGATATGCTGCTGCTCAGCCACGCCGACAATGACCACGCCGGCGGCGCCCGCTCGGTG
GCGGCGGCCGTGCCGGTAGCGCGGATCATCAGCGGCGAGCCCGGGCGTTTGCCGGACAGCCTGCCTGCCGGCCCCTGCGG
CAACGAGGCATGGCAGCTGGACGGCGTGCGCTTCTCCACCTGGCAGTGGCCCGATGCGACGGACAGCAACGGCCGCTCCT
GTGTGCTGTACGTCGAGGCCGGCGGCGAGAGCCTGCTGCTCACCGGCGACCTGCCGGCCGCAGGCGAGGCCGCCTGGCTG
GCCAGCCATCCTGGGCTTGGCGCCGACTGGCTGCTGGCCGGCCACCATGGCAGCCGCAGCGCCTCTTCCGCGGCCTTCGT
CAGGCAACTGGCGCCCCGAGCGGCGCTGGTTTCCCGCTCGCGGCACAACGCCCATGGCCATCCGTCCAGCGAGGTGCTGC
AACGCTTTGCCGAGCAGGGGACGAAGGTGCACGATGTGGCCCGGGAGGGCGCCCTGCGCCTGCTCCTGGGCCAGCGTGGA
ACGCTGCGCGGCGTGCGCGAAAATGCCGGATTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (495-677)

• Competence protein (Competence) (195-458)

• Domain of unknown function (DUF4131) (DUF4131) (16-162)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.083	97.959	0.559
comA	Ralstonia pseudosolanacearum GMI1000	35.31	100	0.365