Detailed information NTG0182502

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: A8L59_RS19120
• Genome accession: NZ_CP015852
• Coordinates: 4306990..4309224 (-)
• Length: 744 a.a.
• NCBI ID: WP_064588698.1
• Uniprot ID: A0AAC9BUU6
• Organism: Pseudomonas koreensis strain CRS05-R5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4301990..4314224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A8L59_RS19085 (A8L59_19065)	murB	4302370..4303389 (-)	1020	WP_064588692.1	UDP-N-acetylmuramate dehydrogenase	-
A8L59_RS19090 (A8L59_19070)	-	4303386..4303850 (-)	465	WP_064588693.1	low molecular weight protein-tyrosine-phosphatase	-
A8L59_RS19095 (A8L59_19075)	kdsB	4303850..4304614 (-)	765	WP_064588694.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
A8L59_RS19100 (A8L59_19080)	-	4304611..4304796 (-)	186	WP_003174668.1	Trm112 family protein	-
A8L59_RS19105 (A8L59_19085)	lpxK	4304818..4305828 (-)	1011	WP_064588695.1	tetraacyldisaccharide 4'-kinase	-
A8L59_RS19110 (A8L59_19090)	-	4305828..4306256 (-)	429	WP_064588696.1	ExbD/TolR family protein	-
A8L59_RS19115 (A8L59_19095)	exbB	4306253..4306888 (-)	636	WP_064588697.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
A8L59_RS19120 (A8L59_19100)	comA	4306990..4309224 (-)	2235	WP_064588698.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A8L59_RS19125 (A8L59_19105)	-	4309360..4309878 (+)	519	WP_064588699.1	DUF2062 domain-containing protein	-
A8L59_RS19130 (A8L59_19110)	-	4310044..4310823 (-)	780	WP_064588700.1	ABC transporter permease	-
A8L59_RS19135 (A8L59_19115)	-	4310820..4311752 (-)	933	WP_064588701.1	ABC transporter ATP-binding protein	-
A8L59_RS19140 (A8L59_19120)	-	4311886..4312509 (-)	624	WP_064588702.1	glutathione S-transferase family protein	-
A8L59_RS19145 (A8L59_19125)	-	4312553..4313212 (-)	660	WP_064588703.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 82018.17 Da
• Isoelectric Point: 10.1106

>NTDB_id=182502 A8L59_RS19120 WP_064588698.1 4306990..4309224(-) (comA) [Pseudomonas koreensis strain CRS05-R5]
MRTGMVALAAGLLVVVFLPVLPPVGLLMVLSVVGLMLLPFRSYPIALLLFGFTWACVSAQWALNDRLPGQLDGETRWVEG
RVVGLPQNSEGVVRFELADARSRHEQLPSLMRLAWYGGPPVNSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TIKDGQRLAEASWAWRDRIRQRLLEADAQGRAGALAALVLGDGSGLSREDWQILQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLTRYGLWPLRWPWLPWACGLAFAAAVGYGLLAGFEVPVQRACVMVGLVLLWRLRFRHLGAWWPLLLAFNTLLLLDPL
ASLRPGFWLSFAAVAVLIFTFGNRLGAWRWWQTWTRAQWLIAIGLCPVLLVLNLPISLSAPLANLLAVPWVSFVVLPPAL
LGTALLPVPYVGEGLLWLAGGLIDVLFRGLALIAGQWPAWIPAAISWWMWTLGSLGALLLLLPRGVPMRPLGWPLLLMLV
MPPRERLPEGVADIWQLDVGQGLAILIRTRNHSVLYDAGPRFGDFDLGERVVLPALRKLGVEQLDLMLLSHADADHAGGA
LAVARRLPVAQVISGDPPGLPAALNASGCDSGRQWQWDGVRFQLWQWAEAHDSNQRSCVLQIEANGERLLLTGDIDTAAE
RVLLESPLAVPTQWLQAPHHGSRSSSSMAMLRALKPHSVLISRGQGNSFGHPHPTVLARYRQQRLRIYDSAEHGAIHLQL
GTFSAPWTMRQQRRFWRDPPVSAR

Nucleotide

• Length: 2235 bp

>NTDB_id=182502 A8L59_RS19120 WP_064588698.1 4306990..4309224(-) (comA) [Pseudomonas koreensis strain CRS05-R5]
ATGCGCACAGGGATGGTGGCGCTGGCAGCCGGTCTGCTGGTGGTGGTTTTTTTACCGGTGTTACCGCCGGTCGGGTTGCT
GATGGTGCTTTCCGTGGTGGGGCTGATGTTGCTGCCGTTTCGCAGCTATCCGATAGCCTTGCTCCTGTTCGGTTTCACTT
GGGCGTGTGTCAGCGCGCAGTGGGCACTGAATGATCGCTTGCCCGGGCAACTTGACGGCGAAACCCGCTGGGTCGAGGGG
CGGGTGGTCGGCTTGCCGCAAAACAGCGAGGGCGTGGTGCGGTTCGAGTTGGCCGATGCCCGTTCGCGGCATGAGCAACT
GCCGTCGTTGATGCGTCTGGCGTGGTATGGCGGGCCGCCGGTCAACAGCGGCGAGCGCTGGCGTTTGGCGGTGAAGCTCA
AGCGTCCCGGCGGTTTGCTTAATCCTGATGCCTTCGATTACGAGGCCTGGCTGCTGGCGCAACGCATTGGTGCGACCGGC
ACGATCAAGGACGGTCAGCGTCTGGCCGAGGCAAGTTGGGCCTGGCGCGACCGCATTCGTCAGCGCTTGCTGGAGGCGGA
CGCCCAGGGCCGGGCCGGGGCCTTGGCGGCGCTGGTGCTGGGCGACGGCTCCGGGCTCAGCCGCGAGGATTGGCAGATCC
TGCAGGACACCGGCACCGTGCATCTGCTGGTGATTTCCGGCCAGCATATCGGGCTGTTGGCAGCGGTGATGTATCTGTTG
GTCGCCGGGCTGACACGTTATGGGCTGTGGCCGTTGCGCTGGCCGTGGCTGCCCTGGGCTTGCGGTCTGGCGTTTGCGGC
GGCAGTCGGTTACGGGTTGCTGGCGGGGTTCGAGGTGCCGGTGCAACGGGCCTGTGTGATGGTCGGGCTGGTGCTGCTGT
GGCGCCTGCGATTTCGCCATCTCGGTGCCTGGTGGCCATTGTTGCTGGCATTCAATACGCTGCTGTTGCTTGACCCGTTG
GCCAGCCTGCGCCCCGGTTTCTGGTTGTCTTTTGCGGCGGTGGCGGTGCTGATCTTCACCTTCGGCAACCGCCTCGGCGC
GTGGCGTTGGTGGCAGACCTGGACCCGCGCGCAATGGCTGATCGCGATTGGCCTGTGCCCGGTGCTGCTGGTGCTGAACC
TGCCGATCAGCCTCAGCGCGCCGTTGGCGAATCTGCTGGCGGTGCCGTGGGTCAGTTTTGTCGTGTTGCCGCCGGCGCTG
CTCGGCACCGCGCTGTTGCCGGTGCCCTATGTCGGCGAAGGTCTGCTGTGGCTGGCGGGTGGACTGATCGATGTGCTGTT
TCGCGGGCTGGCGCTGATTGCCGGGCAATGGCCGGCGTGGATTCCAGCCGCGATTTCGTGGTGGATGTGGACACTGGGCA
GCCTCGGCGCGCTGCTGTTGCTGTTGCCACGCGGCGTGCCGATGCGGCCGTTGGGTTGGCCGTTGCTATTGATGCTGGTG
ATGCCACCGCGTGAGCGACTGCCCGAGGGTGTGGCCGACATCTGGCAACTGGATGTCGGGCAAGGCCTGGCAATTCTGAT
CCGTACGCGCAATCACAGCGTGCTCTACGATGCCGGGCCGCGTTTCGGCGATTTCGATCTGGGCGAGCGGGTGGTGTTGC
CGGCCCTGCGCAAACTCGGCGTCGAGCAACTGGATTTGATGCTGCTCAGCCATGCCGATGCCGATCATGCCGGCGGCGCC
CTGGCAGTGGCGCGCCGCTTGCCGGTCGCTCAGGTCATCAGCGGCGACCCGCCGGGACTGCCCGCCGCGCTGAATGCCAG
TGGGTGTGACAGTGGCCGGCAATGGCAATGGGACGGTGTACGTTTCCAGCTCTGGCAGTGGGCCGAGGCGCACGACAGCA
ATCAGCGCTCCTGTGTATTGCAGATCGAGGCCAATGGCGAGCGCCTGCTGCTGACCGGCGATATTGATACGGCTGCCGAA
CGGGTTTTGCTGGAGAGTCCGTTGGCGGTGCCGACGCAATGGCTGCAGGCGCCGCACCACGGCAGCCGCAGTTCATCCTC
GATGGCTATGCTCAGGGCCTTGAAGCCACATTCGGTGCTGATCTCCCGGGGCCAGGGCAATTCGTTCGGCCACCCGCATC
CCACCGTGCTCGCGCGATATCGCCAGCAGCGGCTGCGGATTTACGACAGTGCCGAACACGGCGCCATTCATCTGCAACTG
GGGACCTTCAGCGCACCATGGACGATGCGTCAGCAACGGCGTTTCTGGCGCGATCCGCCCGTGTCGGCCCGCTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (35-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.726	96.64	0.606