Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A7X73_RS06625 | Genome accession | NZ_CP015642 |
| Coordinates | 1402770..1403744 (+) | Length | 324 a.a. |
| NCBI ID | WP_105966585.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain MR1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1397770..1408744
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7X73_RS06595 (A7X73_06550) | - | 1398579..1399121 (+) | 543 | WP_106421013.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| A7X73_RS06600 (A7X73_06555) | - | 1399134..1400591 (+) | 1458 | WP_103364379.1 | rhomboid family protein | - |
| A7X73_RS06605 (A7X73_06560) | - | 1400575..1400775 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| A7X73_RS06610 (A7X73_06565) | - | 1400775..1401761 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| A7X73_RS06615 (A7X73_06570) | - | 1401761..1402090 (+) | 330 | WP_105966587.1 | MTH1187 family thiamine-binding protein | - |
| A7X73_RS06620 (A7X73_06575) | - | 1402090..1402713 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| A7X73_RS06625 (A7X73_06580) | comGA | 1402770..1403744 (+) | 975 | WP_105966585.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A7X73_RS06630 (A7X73_06585) | comGB | 1403716..1404789 (+) | 1074 | WP_105977709.1 | competence type IV pilus assembly protein ComGB | - |
| A7X73_RS06635 (A7X73_06590) | comGC | 1404807..1405136 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A7X73_RS06640 (A7X73_06595) | - | 1405139..1405492 (+) | 354 | WP_257790907.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| A7X73_RS06645 (A7X73_06600) | comGF | 1405783..1406277 (+) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| A7X73_RS06655 (A7X73_06610) | - | 1406442..1406981 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| A7X73_RS06660 (A7X73_06615) | gcvT | 1407160..1408254 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36980.98 Da Isoelectric Point: 7.7580
>NTDB_id=181682 A7X73_RS06625 WP_105966585.1 1402770..1403744(+) (comGA) [Staphylococcus simulans strain MR1]
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=181682 A7X73_RS06625 WP_105966585.1 1402770..1403744(+) (comGA) [Staphylococcus simulans strain MR1]
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.372 |
99.691 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.372 |
99.691 |
0.602 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
37.931 |
98.457 |
0.373 |