Detailed information NTG0181659

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PS273GM_RS16050
• Genome accession: NZ_CP015641
• Coordinates: 3441546..3443771 (+)
• Length: 741 a.a.
• NCBI ID: WP_196766694.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain 273
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3436546..3448771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PS273GM_RS16020 (PS273GM_16020)	-	3436657..3436962 (-)	306	WP_064481918.1	hypothetical protein	-
PS273GM_RS16025 (PS273GM_16025)	-	3436966..3437538 (-)	573	WP_064481919.1	PilZ domain-containing protein	-
PS273GM_RS16030 (PS273GM_16030)	-	3437639..3438886 (+)	1248	WP_064481920.1	lipoprotein-releasing ABC transporter permease subunit	-
PS273GM_RS16035 (PS273GM_16035)	lolD	3438879..3439592 (+)	714	WP_420480402.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PS273GM_RS16040 (PS273GM_16040)	-	3439592..3440839 (+)	1248	WP_064481921.1	lipoprotein-releasing ABC transporter permease subunit	-
PS273GM_RS16045 (PS273GM_16045)	-	3440849..3441364 (-)	516	WP_045428862.1	DUF2062 domain-containing protein	-
PS273GM_RS16050 (PS273GM_16050)	comA	3441546..3443771 (+)	2226	WP_196766694.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PS273GM_RS16055 (PS273GM_16055)	-	3443843..3444475 (+)	633	WP_045428860.1	MotA/TolQ/ExbB proton channel family protein	-
PS273GM_RS16060 (PS273GM_16060)	-	3444472..3444900 (+)	429	WP_045428858.1	ExbD/TolR family protein	-
PS273GM_RS16065 (PS273GM_16065)	lpxK	3444900..3445904 (+)	1005	WP_045428856.1	tetraacyldisaccharide 4'-kinase	-
PS273GM_RS16070 (PS273GM_16070)	-	3445954..3446139 (+)	186	WP_019342470.1	Trm112 family protein	-
PS273GM_RS16075 (PS273GM_16075)	kdsB	3446136..3446900 (+)	765	WP_045428854.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PS273GM_RS16080 (PS273GM_16080)	-	3446903..3447367 (+)	465	WP_045428852.1	low molecular weight protein-tyrosine-phosphatase	-
PS273GM_RS16085 (PS273GM_16085)	murB	3447364..3448383 (+)	1020	WP_045428850.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80652.40 Da
• Isoelectric Point: 9.2314

>NTDB_id=181659 PS273GM_RS16050 WP_196766694.1 3441546..3443771(+) (comA) [Stutzerimonas stutzeri strain 273]
MRTAMLALAAGLLLLRFLPQLPPVSALPFILAAGLVLLPFRWRAIGCFLCGFAWACLSAHEALDDRLSTERDGRTFWLEG
TVSDLPDVRGGVVRFELANISSRHSDLPSRLRLAWYDGPMVQAGERWRLAAKLKKPRGLVNPHSFDYEAWLLARRIGASG
TIKAGERVSVAEGGPGWRDQLRQRLLAVDAQGRSGAIAALVVGDDSGLSTTDWRTLQDTGTVHLMVISGQHVGMLAGLLY
GLVALLARWGIWPRRVAWLPCACSLALVGALAYGWLAGFEVPVQRALVMVALVLLWRLRYRHLGVWLPLLIALDAVLLLD
PLVGLQSGFWLSFLAVALLALVFRGRLGSWSWWRALGRAQWSMALGLLPILLALGLPVSLSGPIANLFAVPLVSAVIVPL
SLLGTSLLWLPGVGEPVLWVAGGLLAILFDALQWLAGWQPAWLPASLPFWAWLLVALGTLLILLPPGIPFRALGLVFLLP
LLFPPIDKPAAGQAEVWLFDVGQGLAVLVRTHDHALLYDTGPRYGDFDIGERVVLPSLRTLGVSGLDLLILSHADSDHAG
GASAIQRQIRAGRVVSGEPARLPASLGAEMCRSGEAWEWNGVRFTLWQSPRARDGNQSSCVLLIEASGERLLLTGDIDVD
TEQVLLTSNIPLEVDWLLVPHHGSRSSSSTAFIEATGAGGALISRSLHNAFGHPHLEVLQRLHTAGARLYDTAELGAIRI
RLGRFEPVRGLRTERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=181659 PS273GM_RS16050 WP_196766694.1 3441546..3443771(+) (comA) [Stutzerimonas stutzeri strain 273]
ATGCGTACAGCGATGCTGGCGCTGGCAGCAGGCCTTCTACTGCTGCGTTTTTTACCGCAATTACCGCCTGTCTCAGCGTT
GCCGTTCATATTGGCGGCGGGCCTGGTCTTGCTTCCGTTCCGCTGGCGAGCGATCGGTTGTTTTCTCTGCGGGTTTGCAT
GGGCGTGTCTCAGCGCCCATGAGGCGCTGGATGACCGCCTTTCAACCGAGCGTGATGGCCGTACGTTCTGGCTCGAAGGT
ACGGTGAGCGACCTACCGGATGTTCGTGGCGGTGTGGTGCGTTTCGAACTGGCCAATATATCGTCCCGGCATAGCGACCT
GCCGTCCAGGCTTCGCCTGGCATGGTACGACGGCCCCATGGTGCAGGCGGGTGAGCGATGGCGGCTCGCTGCTAAATTGA
AAAAGCCACGGGGCTTGGTCAATCCGCACTCTTTCGATTACGAGGCTTGGCTCTTGGCTCGGCGGATCGGTGCCAGCGGC
ACGATCAAAGCCGGAGAGCGCGTGTCGGTGGCAGAGGGTGGACCGGGGTGGCGCGACCAGTTGCGGCAACGCTTGTTGGC
GGTCGATGCTCAGGGCCGCTCCGGCGCTATTGCCGCGCTGGTAGTGGGCGATGACAGCGGCCTGTCCACCACGGATTGGC
GCACGCTCCAGGACACCGGAACCGTTCATTTGATGGTTATATCGGGGCAGCACGTGGGCATGCTGGCCGGCTTGCTTTAC
GGCCTGGTGGCATTGTTAGCGCGTTGGGGAATTTGGCCGCGGCGCGTCGCCTGGTTGCCCTGCGCTTGTAGCCTAGCCTT
GGTTGGGGCGCTTGCGTACGGCTGGCTGGCGGGTTTTGAAGTCCCAGTCCAGCGAGCGCTGGTGATGGTCGCTCTGGTGC
TCCTGTGGCGTTTGCGGTATCGACATTTAGGTGTCTGGCTGCCACTGCTGATTGCCCTTGATGCTGTCCTGCTGTTGGAT
CCGCTAGTAGGGCTGCAGTCGGGCTTCTGGTTGTCTTTTCTGGCGGTGGCGCTTCTTGCTCTGGTGTTCCGCGGCCGGCT
TGGAAGCTGGAGTTGGTGGCGCGCATTAGGCCGTGCACAGTGGAGCATGGCCCTGGGCCTGTTGCCGATCCTGCTGGCGC
TAGGCTTGCCGGTTAGCCTGAGTGGGCCGATTGCCAACCTCTTTGCAGTCCCACTGGTCAGCGCGGTAATCGTTCCGCTG
TCGTTGTTAGGCACGTCCTTGTTGTGGTTGCCAGGCGTTGGCGAGCCGGTGCTATGGGTGGCCGGTGGGTTATTGGCAAT
TCTCTTTGATGCGCTGCAATGGCTTGCCGGCTGGCAGCCGGCGTGGCTACCAGCGTCATTGCCGTTTTGGGCTTGGCTGC
TGGTTGCGCTTGGGACGCTGCTGATCCTGCTTCCGCCCGGAATACCGTTTCGGGCGTTGGGTCTGGTGTTTCTGCTGCCG
CTGCTGTTTCCACCCATCGACAAGCCGGCAGCAGGGCAGGCGGAAGTCTGGCTGTTCGACGTCGGTCAGGGGCTCGCTGT
GCTGGTCCGCACGCATGACCATGCGCTGCTGTACGACACAGGGCCGCGATATGGTGACTTCGACATCGGCGAGCGGGTTG
TATTGCCGTCGTTGCGCACGCTGGGGGTGAGCGGTCTCGATCTGCTGATTCTCAGCCATGCCGATAGCGACCATGCGGGT
GGCGCTTCGGCGATCCAGCGACAGATACGAGCTGGGCGAGTGGTCAGCGGTGAGCCGGCAAGACTGCCTGCTTCGCTAGG
CGCCGAGATGTGCCGCTCCGGGGAGGCCTGGGAATGGAATGGAGTCCGCTTTACGCTATGGCAATCACCACGGGCCAGAG
ATGGAAACCAGTCCTCCTGCGTGCTACTGATCGAGGCGAGCGGCGAACGTCTGCTGCTCACCGGCGACATCGACGTGGAT
ACCGAGCAAGTACTCCTGACGAGCAACATACCGCTTGAGGTCGATTGGTTGTTGGTGCCACATCACGGCAGTCGCAGCTC
GTCGTCAACCGCATTCATCGAGGCAACAGGAGCCGGAGGTGCGCTCATCTCGCGCAGCTTGCATAACGCATTCGGCCATC
CGCATCTGGAAGTGTTGCAGCGGCTGCACACTGCCGGAGCGCGACTTTATGACACGGCAGAGCTAGGAGCGATTCGGATT
CGCCTCGGCCGTTTTGAGCCTGTTCGAGGATTACGTACCGAGCGTCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-682)

• Domain of unknown function (DUF4131) (DUF4131) (14-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	69.209	95.547	0.661
comA	Ralstonia pseudosolanacearum GMI1000	35.315	100	0.401