Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AsACE_RS10770 Genome accession   NZ_CP015615
Coordinates   2230535..2230918 (-) Length   127 a.a.
NCBI ID   WP_004814763.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain ACE     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2225535..2235918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AsACE_RS10755 (AsACE_CH02143) - 2227477..2229549 (-) 2073 WP_076754032.1 methyl-accepting chemotaxis protein -
  AsACE_RS10760 (AsACE_CH02144) - 2229594..2230130 (-) 537 WP_004814765.1 chemotaxis protein CheW -
  AsACE_RS10765 (AsACE_CH02145) - 2230136..2230504 (-) 369 WP_004814764.1 response regulator -
  AsACE_RS10770 (AsACE_CH02146) pilG 2230535..2230918 (-) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  AsACE_RS10775 (AsACE_CH02147) - 2231226..2231885 (+) 660 WP_076754035.1 hypothetical protein -
  AsACE_RS10780 (AsACE_CH02148) - 2231937..2233070 (+) 1134 WP_076754036.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14201.30 Da        Isoelectric Point: 4.7172

>NTDB_id=181529 AsACE_RS10770 WP_004814763.1 2230535..2230918(-) (pilG) [Acinetobacter schindleri strain ACE]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=181529 AsACE_RS10770 WP_004814763.1 2230535..2230918(-) (pilG) [Acinetobacter schindleri strain ACE]
ATGGACGATAAATTCCAAAATCTAAAAGTGATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCAGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTCATTACCGCAGTAGACGGTTTTGAAGCATTGTCAAAAATTGCAGAGGCAAATCCCGACA
TCGTTTTTGTAGATATCATGATGCCTCGCCTTGATGGGTATCAGACTTGTGCCTTAATTAAAAACTCGCAAAGTTATCAG
AACATTCCTGTTATTATGCTATCGAGTAAAGATGGTTTGTTCGATCAGGCCAAAGGCCGTGTGGTAGGTTCAGATGAATA
TCTCACCAAGCCATTTAGCAAAGATGAGTTGCTTACCGCAATCCGCAACCATATCAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment