Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   BSA41_RS09845 Genome accession   NZ_CP015610
Coordinates   1869230..1869523 (-) Length   97 a.a.
NCBI ID   WP_024422977.1    Uniprot ID   A0A0M2EIN6
Organism   Bacillus safensis strain U41     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1864230..1874523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA41_RS09795 (BSA41_09565) sinR 1864394..1864729 (+) 336 WP_024422969.1 transcriptional regulator SinR Regulator
  BSA41_RS09800 (BSA41_09570) tasA 1864797..1865597 (-) 801 WP_075611635.1 biofilm matrix protein TasA -
  BSA41_RS09805 (BSA41_09575) sipW 1865655..1866227 (-) 573 WP_047202287.1 signal peptidase I SipW -
  BSA41_RS09810 (BSA41_09580) tapA 1866279..1866806 (-) 528 WP_075611636.1 amyloid fiber anchoring/assembly protein TapA -
  BSA41_RS09815 (BSA41_09585) - 1867106..1867384 (+) 279 WP_231120214.1 DUF3889 domain-containing protein -
  BSA41_RS09820 (BSA41_09590) - 1867417..1867611 (-) 195 WP_024718846.1 YqzE family protein -
  BSA41_RS09825 (BSA41_09595) - 1867671..1868054 (-) 384 WP_075611637.1 competence type IV pilus minor pilin ComGG -
  BSA41_RS09830 (BSA41_09600) comGF 1868051..1868455 (-) 405 WP_231120191.1 competence type IV pilus minor pilin ComGF -
  BSA41_RS09835 (BSA41_09605) comGE 1868490..1868807 (-) 318 WP_075611639.1 competence type IV pilus minor pilin ComGE -
  BSA41_RS09840 (BSA41_09610) comGD 1868791..1869237 (-) 447 WP_075611640.1 competence type IV pilus minor pilin ComGD -
  BSA41_RS09845 (BSA41_09615) comGC 1869230..1869523 (-) 294 WP_024422977.1 competence type IV pilus major pilin ComGC Machinery gene
  BSA41_RS09850 (BSA41_09620) comGB 1869540..1870619 (-) 1080 WP_231120189.1 competence type IV pilus assembly protein ComGB -
  BSA41_RS09855 (BSA41_09625) comGA 1870561..1871631 (-) 1071 WP_081378155.1 competence type IV pilus ATPase ComGA Machinery gene
  BSA41_RS09860 (BSA41_09630) - 1871809..1872684 (-) 876 WP_039179956.1 STAS domain-containing protein -
  BSA41_RS09870 (BSA41_09640) - 1872909..1873289 (-) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  BSA41_RS09875 (BSA41_09645) - 1873504..1873746 (+) 243 WP_003217440.1 DUF2626 domain-containing protein -
  BSA41_RS09880 (BSA41_09650) - 1873794..1874432 (-) 639 WP_039179959.1 MBL fold metallo-hydrolase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10686.62 Da        Isoelectric Point: 7.3218

>NTDB_id=181387 BSA41_RS09845 WP_024422977.1 1869230..1869523(-) (comGC) [Bacillus safensis strain U41]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQAIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIVIQNGNVKHE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=181387 BSA41_RS09845 WP_024422977.1 1869230..1869523(-) (comGC) [Bacillus safensis strain U41]
ATGAATGATAAAGGGTTTACCCTGTTAGAAATGTTAATTGTCATGCTCGTGATATCCATTCTTTTACTCATTACCATACC
GAATATCACACGTCATCACCAAGCAATTCAAGCAAAGGGCTGTGAAGGGCTCAAATCAATGGTCAGCACACAAGTGATGG
CATATGAATTGGAGCATGATGGGAAGACACCATCTTTAGCTGAGTTAGAAAAAGAAGGGTATGTTAAAAAGGGATTAACC
TGTCCTAATGGAAAAGCGATTGTCATTCAAAACGGCAACGTGAAGCATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M2EIN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

42.222

92.784

0.392
  comGC Staphylococcus aureus N315

42.222

92.784

0.392

Multiple sequence alignment