Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | A3K93_RS11200 | Genome accession | NZ_CP015594 |
| Coordinates | 2321583..2322227 (-) | Length | 214 a.a. |
| NCBI ID | WP_067731292.1 | Uniprot ID | A0A172YRE8 |
| Organism | Acinetobacter sp. NCu2D-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2316583..2327227
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3K93_RS11180 (A3K93_11180) | aroK | 2317653..2318189 (-) | 537 | WP_067731288.1 | shikimate kinase AroK | - |
| A3K93_RS11185 (A3K93_11185) | pilQ | 2318226..2320331 (-) | 2106 | WP_067731289.1 | type IV pilus secretin PilQ | Machinery gene |
| A3K93_RS11190 (A3K93_11190) | pilP | 2320349..2320876 (-) | 528 | WP_067731290.1 | pilus assembly protein PilP | Machinery gene |
| A3K93_RS11195 (A3K93_11195) | comO | 2320876..2321586 (-) | 711 | WP_067731291.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A3K93_RS11200 (A3K93_11200) | comN | 2321583..2322227 (-) | 645 | WP_067731292.1 | PilN domain-containing protein | Machinery gene |
| A3K93_RS11205 (A3K93_11205) | pilM | 2322227..2323285 (-) | 1059 | WP_067731293.1 | pilus assembly protein PilM | Machinery gene |
| A3K93_RS11210 (A3K93_11210) | ponA | 2323452..2325980 (+) | 2529 | WP_067731294.1 | penicillin-binding protein PBP1a | - |
| A3K93_RS11215 (A3K93_11215) | - | 2326023..2326826 (-) | 804 | WP_067731735.1 | methyltransferase domain-containing protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23676.95 Da Isoelectric Point: 5.3625
>NTDB_id=181256 A3K93_RS11200 WP_067731292.1 2321583..2322227(-) (comN) [Acinetobacter sp. NCu2D-2]
MAKINLLPWRDELRLKRNNEFIAYSVAALLIGLAAAGGTWFYFDQKLQDQEQANQLIVSTNQNLDVQLKALDGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRITPSNMYITKFVRAGNKFTIEGKAESPNTVAELLRNLEASSWYRNAFMNSFLV
AEEKKDKPASSVIPRVEESYGTFTVTVDLDQPAAPVAADPASQPPATATGGATS
MAKINLLPWRDELRLKRNNEFIAYSVAALLIGLAAAGGTWFYFDQKLQDQEQANQLIVSTNQNLDVQLKALDGLQEQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRITPSNMYITKFVRAGNKFTIEGKAESPNTVAELLRNLEASSWYRNAFMNSFLV
AEEKKDKPASSVIPRVEESYGTFTVTVDLDQPAAPVAADPASQPPATATGGATS
Nucleotide
Download Length: 645 bp
>NTDB_id=181256 A3K93_RS11200 WP_067731292.1 2321583..2322227(-) (comN) [Acinetobacter sp. NCu2D-2]
ATGGCTAAAATTAACTTACTGCCTTGGCGCGACGAGCTAAGACTAAAAAGAAATAACGAATTTATTGCGTATTCTGTTGC
AGCACTGCTTATTGGTCTGGCGGCAGCTGGGGGAACATGGTTCTACTTTGATCAAAAATTACAAGATCAAGAACAAGCCA
ATCAATTGATTGTGAGCACCAACCAGAACTTGGATGTACAGCTTAAAGCATTGGATGGTCTACAAGAACAGCGCAATGCA
ATTGTTGAACGTATGAAGTTAATTCAAGGTTTACAAACACAGCGTCCGATCGCAGTACATTTGATTGATGAGATTGTCCG
TATCACACCAAGCAATATGTACATTACCAAATTTGTACGTGCAGGGAATAAATTTACCATCGAAGGTAAGGCTGAAAGTC
CAAATACTGTGGCTGAGTTGCTACGTAATTTGGAAGCGTCTTCTTGGTACCGTAATGCCTTTATGAATTCATTCCTCGTG
GCTGAAGAGAAAAAGGATAAGCCTGCAAGTTCAGTGATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACTGT
TGATTTAGATCAACCTGCTGCACCTGTAGCTGCTGATCCAGCCAGTCAACCACCTGCTACAGCGACAGGAGGGGCAACAT
CATGA
ATGGCTAAAATTAACTTACTGCCTTGGCGCGACGAGCTAAGACTAAAAAGAAATAACGAATTTATTGCGTATTCTGTTGC
AGCACTGCTTATTGGTCTGGCGGCAGCTGGGGGAACATGGTTCTACTTTGATCAAAAATTACAAGATCAAGAACAAGCCA
ATCAATTGATTGTGAGCACCAACCAGAACTTGGATGTACAGCTTAAAGCATTGGATGGTCTACAAGAACAGCGCAATGCA
ATTGTTGAACGTATGAAGTTAATTCAAGGTTTACAAACACAGCGTCCGATCGCAGTACATTTGATTGATGAGATTGTCCG
TATCACACCAAGCAATATGTACATTACCAAATTTGTACGTGCAGGGAATAAATTTACCATCGAAGGTAAGGCTGAAAGTC
CAAATACTGTGGCTGAGTTGCTACGTAATTTGGAAGCGTCTTCTTGGTACCGTAATGCCTTTATGAATTCATTCCTCGTG
GCTGAAGAGAAAAAGGATAAGCCTGCAAGTTCAGTGATTCCACGTGTTGAAGAATCTTATGGCACATTTACAGTGACTGT
TGATTTAGATCAACCTGCTGCACCTGTAGCTGCTGATCCAGCCAGTCAACCACCTGCTACAGCGACAGGAGGGGCAACAT
CATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
69.712 |
97.196 |
0.678 |
| pilN | Acinetobacter baumannii D1279779 |
66.509 |
99.065 |
0.659 |