Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A3K93_RS09095 Genome accession   NZ_CP015594
Coordinates   1894575..1894958 (-) Length   127 a.a.
NCBI ID   WP_067730907.1    Uniprot ID   A0A172YQC2
Organism   Acinetobacter sp. NCu2D-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1889575..1899958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3K93_RS09080 (A3K93_09080) - 1891523..1893595 (-) 2073 WP_067730901.1 methyl-accepting chemotaxis protein -
  A3K93_RS09085 (A3K93_09085) - 1893640..1894176 (-) 537 WP_067730903.1 chemotaxis protein CheW -
  A3K93_RS09090 (A3K93_09090) - 1894182..1894550 (-) 369 WP_067730905.1 response regulator -
  A3K93_RS09095 (A3K93_09095) pilG 1894575..1894958 (-) 384 WP_067730907.1 twitching motility response regulator PilG Regulator
  A3K93_RS09100 (A3K93_09100) - 1895288..1895923 (+) 636 WP_067731716.1 hypothetical protein -
  A3K93_RS09105 (A3K93_09105) - 1896034..1897101 (+) 1068 WP_227509897.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14286.37 Da        Isoelectric Point: 4.7172

>NTDB_id=181246 A3K93_RS09095 WP_067730907.1 1894575..1894958(-) (pilG) [Acinetobacter sp. NCu2D-2]
MDDTFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAETTPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHIRA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=181246 A3K93_RS09095 WP_067730907.1 1894575..1894958(-) (pilG) [Acinetobacter sp. NCu2D-2]
ATGGACGATACATTTCAAAATTTAAAAGTTATGGTGATTGATGACTCAAAAACCATTCGTCGTACAGCAGAAACTCTTCT
ACAACGAGAAGGATGTGAAGTGGTGACTGCAGTTGATGGTTTTGAAGCACTGTCAAAAATTGCAGAAACAACACCAGACA
TCGTTTTTGTCGATATTATGATGCCACGTTTAGACGGTTACCAAACTTGTGCATTAATCAAAAACTCTCAAAATTACCAA
AATATCCCTGTGATTATGCTGTCAAGTAAAGACGGTCTATTCGATCAGGCGAAAGGTCGTGTTGTTGGTTCGGATGAATA
TTTGACTAAACCGTTCAGTAAAGATGAATTGCTTAATGCAATCCGTAACCATATCCGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172YQC2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.701

100

0.937
  vicR Streptococcus mutans UA159

41.525

92.913

0.386
  pilH Synechocystis sp. PCC 6803

41.026

92.126

0.378

Multiple sequence alignment