Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   A3K93_RS09075 Genome accession   NZ_CP015594
Coordinates   1886757..1891361 (-) Length   1534 a.a.
NCBI ID   WP_067730899.1    Uniprot ID   A0A172YQN1
Organism   Acinetobacter sp. NCu2D-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1881757..1896361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3K93_RS09045 (A3K93_09045) elsL 1882837..1883343 (-) 507 WP_067730889.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  A3K93_RS09050 (A3K93_09050) - 1883348..1883749 (-) 402 WP_067730891.1 YbaN family protein -
  A3K93_RS09055 (A3K93_09055) - 1883837..1884694 (+) 858 WP_067730893.1 DUF1853 family protein -
  A3K93_RS09060 (A3K93_09060) - 1884826..1884975 (+) 150 WP_067731715.1 entericidin A/B family lipoprotein -
  A3K93_RS09065 (A3K93_09065) dapE 1885101..1886234 (+) 1134 WP_067730895.1 succinyl-diaminopimelate desuccinylase -
  A3K93_RS09070 (A3K93_09070) - 1886295..1886753 (-) 459 WP_067730897.1 hypothetical protein -
  A3K93_RS09075 (A3K93_09075) chpA 1886757..1891361 (-) 4605 WP_067730899.1 Hpt domain-containing protein Regulator
  A3K93_RS09080 (A3K93_09080) - 1891523..1893595 (-) 2073 WP_067730901.1 methyl-accepting chemotaxis protein -
  A3K93_RS09085 (A3K93_09085) - 1893640..1894176 (-) 537 WP_067730903.1 chemotaxis protein CheW -
  A3K93_RS09090 (A3K93_09090) - 1894182..1894550 (-) 369 WP_067730905.1 response regulator -
  A3K93_RS09095 (A3K93_09095) pilG 1894575..1894958 (-) 384 WP_067730907.1 twitching motility response regulator PilG Regulator
  A3K93_RS09100 (A3K93_09100) - 1895288..1895923 (+) 636 WP_067731716.1 hypothetical protein -

Sequence


Protein


Download         Length: 1534 a.a.        Molecular weight: 171436.43 Da        Isoelectric Point: 4.2349

>NTDB_id=181245 A3K93_RS09075 WP_067730899.1 1886757..1891361(-) (chpA) [Acinetobacter sp. NCu2D-2]
MKEILKNLVETTTLPEDEYLDQDAEILEIFVEEIEEIFVELNALFPDWLSQPNDQEILATVRRHFHTLKGSGRMVGAKAA
GELAWAVEDTLNRVKSGSIPLTPVIQQFAKAAFNVYQYTLYPKFKNVEALDVDLRPLVLLGQQLQQQQSPEPALEELLVL
ADQLTAEGQSTGLEIISNDFDVIESVMADGSMAVADLAHVEATPESTVVLELVDSSEPTDIEVTLGIFLEEAEEHLETIT
RFLTNSDEKNQDYNGLIRALHTLRGSSSMAHIDEIFDASSKVENLFKTLVQDEISTSSKAIGLLQQYAEFVSDYLHILPT
GNTDQLSKIHQTFDRAWDDYGFSADDNVIETKGIVSQLVELDIDLLLDAEFEFDTRVKDEYPDYVESLSKQATELLMHTE
NRAAQGIYDFTSELKNAYDALIDKPALLQNDYAFELFAHVHQEFIHLFDTLAAGQRVILSEDTTKRLADLSAYVQQDIDE
VAEVAEEVVEGAAVVELTTTAATTNAGHIDFATLSQQIASDRQLIDSSESNSDFDPDLVDIFLEEADELLVGIDEDLNTW
SKNHDDTHSLKNLMRYLHTLKGSANMIAASNIGSIAHELESIYERVIRHQIHVSTNLIQIIRLVQDNVSDRIQTIRDQSV
DYPATAAISILQNIQSLLSGDAAQVVVTPESDATLEAEVVNFVAELAIENAPVLETETSFAMDFIDPSVEEQETITAESD
EVTLSSAETSSFDTTSQSEAEPELTNIEASTPLSEEDELKSIVEETFLEESEEILNNTEKLLNQWFDQRSDRSLLLQLQR
AAHSIKGGARMIANETIASIAYELETTFEQFAVHHFNSNAYDALLLKTLDWLRTAIFKREYNNFEQIRTALEAIEYVDVT
AQLPERLTKTETLSTATGFEFIQGDGTEPPSMLGEWQESMTHDTSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQL
GNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLTESASDLVDFKTTLSDKIR
DTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAELIVQNSEGELDRTILERLVTPFEHMLRNA
IDHGLEDTDQRIALNKPEVGSIVLDISRQGTDVLVSFSDDGKGIDAERIREKAISLGLVKPDQIIEQEELLQFIFHPGFS
TAKAVTQISGRGVGLDVVQSEIKALGGHVSIQSTLGKGTTFTIRVPTTVAVSDALMVKVGDQQFAIALAQIDRIVRIAPA
TLETYFNSKEDYFKIDGTDYKLRYLSEFVANQPIPRLNNVGHSLPVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQF
ANVGVVAGATILGDGQVCLILDGQNVARQIQATQRIKHTTEHRDIRTSSTRRLVMIVDDSVTVRKVTSRLLERQGYDIVT
AKDGVDAMEQLENVRPDLMLLDIEMPRMDGFEVTNLVRRHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAE
LLANIQDLIAEKQG

Nucleotide


Download         Length: 4605 bp        

>NTDB_id=181245 A3K93_RS09075 WP_067730899.1 1886757..1891361(-) (chpA) [Acinetobacter sp. NCu2D-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACAACAACGCTTCCTGAAGATGAATATCTAGATCAAGATGCAGAAATCTT
AGAGATTTTTGTAGAAGAGATAGAGGAAATTTTCGTTGAGCTAAATGCTTTATTTCCAGATTGGTTATCTCAACCGAATG
ACCAAGAAATTCTTGCAACTGTACGTCGCCATTTTCATACATTAAAAGGCTCTGGCCGGATGGTGGGAGCAAAAGCAGCG
GGTGAATTGGCATGGGCTGTAGAAGATACACTGAACCGTGTTAAATCAGGTTCAATTCCATTAACGCCTGTAATTCAACA
ATTTGCAAAAGCTGCTTTTAATGTTTATCAATATACCTTGTATCCAAAATTTAAAAATGTAGAAGCTTTGGATGTTGATC
TACGTCCATTGGTGTTATTAGGGCAACAATTACAACAACAGCAAAGCCCTGAACCTGCATTAGAAGAGTTATTGGTCTTG
GCAGATCAATTAACCGCAGAAGGTCAATCGACAGGCCTTGAAATTATATCGAATGACTTTGATGTAATTGAAAGTGTCAT
GGCTGATGGATCCATGGCTGTCGCAGATCTAGCTCATGTGGAAGCGACTCCTGAGTCAACTGTGGTATTAGAGCTAGTAG
ATTCTTCAGAACCGACTGATATTGAAGTGACACTGGGTATTTTCCTCGAAGAAGCAGAGGAACACTTAGAAACAATTACT
CGTTTCTTAACCAATAGTGATGAAAAAAATCAAGATTATAATGGCTTAATTCGCGCACTTCATACCCTGCGTGGTAGTTC
ATCAATGGCACATATTGATGAAATTTTTGATGCCAGCTCTAAAGTTGAAAATCTATTTAAAACCCTCGTGCAAGATGAAA
TCAGCACAAGTTCAAAAGCAATTGGGCTGTTACAGCAATATGCGGAATTTGTCAGTGATTACTTGCACATCTTGCCGACA
GGCAATACAGATCAATTAAGCAAAATACACCAAACTTTTGATCGTGCATGGGACGATTATGGCTTCTCTGCAGATGACAA
TGTCATAGAAACCAAAGGGATTGTCTCTCAATTGGTTGAGCTTGATATTGATCTACTTTTGGATGCTGAATTTGAGTTCG
ATACTCGAGTGAAGGATGAATATCCAGACTATGTAGAGTCGCTGAGCAAACAAGCGACTGAATTGTTAATGCATACGGAA
AATCGTGCTGCACAGGGTATTTATGATTTTACCTCAGAACTGAAAAATGCCTACGATGCATTAATTGATAAGCCAGCATT
GCTACAAAATGATTATGCATTTGAATTGTTTGCCCACGTACACCAAGAGTTCATTCATTTGTTTGATACTTTGGCTGCGG
GGCAGCGTGTCATCTTGAGTGAAGATACAACCAAACGCTTGGCAGATTTGTCTGCTTATGTACAGCAAGACATTGACGAA
GTTGCTGAAGTTGCGGAAGAAGTGGTGGAAGGTGCTGCTGTCGTTGAGCTTACTACGACTGCGGCAACGACCAATGCAGG
TCATATTGATTTTGCAACGTTAAGTCAACAAATTGCTTCTGACCGTCAGCTGATTGATTCTTCTGAATCAAATTCAGACT
TTGATCCTGATTTGGTTGATATTTTCCTTGAAGAAGCAGATGAATTACTTGTCGGTATTGATGAAGACCTGAATACATGG
TCTAAAAATCATGATGATACCCATTCCTTAAAGAATTTGATGCGTTATTTGCATACCTTAAAAGGTAGCGCAAATATGAT
TGCTGCATCAAATATCGGCTCAATTGCCCATGAGCTTGAAAGTATTTATGAGCGAGTAATTCGCCATCAAATTCATGTAT
CTACAAACTTGATTCAGATTATTCGTCTAGTACAGGATAATGTGTCTGATCGTATTCAAACGATTCGAGACCAATCGGTT
GATTATCCTGCGACTGCTGCAATTTCAATTTTACAAAATATCCAAAGCTTGCTTTCAGGTGATGCTGCACAAGTTGTAGT
GACCCCTGAATCTGATGCAACACTTGAAGCTGAAGTTGTCAATTTTGTTGCAGAGCTAGCTATTGAAAATGCGCCTGTAT
TAGAAACAGAAACCAGCTTTGCAATGGACTTTATTGATCCATCTGTAGAAGAGCAGGAAACTATTACAGCAGAAAGTGAT
GAAGTAACACTTTCATCTGCTGAAACCTCATCGTTTGATACTACATCGCAAAGTGAAGCAGAACCTGAACTTACTAATAT
TGAAGCTTCGACACCTCTCAGCGAAGAAGATGAGCTAAAATCAATTGTTGAAGAAACTTTCTTAGAAGAATCTGAGGAAA
TTCTCAATAATACTGAGAAACTGTTAAATCAATGGTTTGATCAGCGTAGTGACCGAAGTTTATTACTCCAATTGCAACGT
GCTGCCCACAGTATCAAAGGTGGTGCACGTATGATTGCCAATGAGACCATTGCAAGCATTGCCTATGAGTTAGAAACCAC
ATTCGAGCAATTTGCGGTACATCACTTTAACTCGAATGCGTATGATGCATTGCTGTTAAAAACGCTCGATTGGCTACGCA
CAGCAATCTTTAAACGTGAATACAATAACTTCGAGCAAATTCGAACTGCTTTAGAAGCGATTGAATATGTTGATGTTACG
GCTCAATTACCTGAACGACTAACCAAAACGGAAACGTTGTCTACGGCTACAGGCTTTGAATTTATTCAAGGTGACGGTAC
AGAGCCACCAAGTATGTTGGGTGAATGGCAAGAATCGATGACTCACGATACAAGTAACGAGATGATTCGTATCTCGGCAG
ATCTTGTTGAGAAGATGATTGACTTATCGGGTGAGAACTCGATTAACCGTTCACGAATTGAGATGGACTTAGGTCAGCTT
GGCAATACCTTGAACGAGATGGAGCTTGCGATTAAACGTTTGGCGGATCAGTTACGTCGAATGGAAGGAGAGCTGGAATC
TCAAATTATTGCCAAACATGGATCTGAAAACTCACGCTATGCCGATTTTGACCCATTAGAAATGGACCAATATTCATCTT
TAAATCAACTGTCTAAATCATTGACAGAGTCAGCATCGGATTTAGTCGATTTCAAAACCACGCTTTCTGACAAAATTCGT
GATACTGAAGGTTTATTACTACAACAATCGCGCATTCAAGCAGAAATTCAAGAAAGTTTGATGCGTACTCGCTTGGTGCC
TTTTGACCGTATGTTGCCGCGTTTGCAACGTATTGTGCGTCAAACATCGACGACATTAAACCGACCTGCTGAACTCATTG
TGCAAAACTCAGAAGGTGAATTAGACCGTACCATTCTTGAACGTTTGGTGACACCTTTCGAGCACATGCTACGTAATGCG
ATTGACCATGGTTTAGAAGATACCGATCAACGTATTGCACTAAATAAACCTGAAGTGGGTTCAATCGTGCTGGATATCAG
CCGTCAGGGTACCGATGTTCTCGTTTCATTTAGTGATGATGGTAAAGGGATCGATGCGGAGCGTATCCGTGAGAAAGCCA
TCAGTTTAGGTTTGGTAAAACCTGATCAGATCATTGAGCAAGAAGAACTATTACAGTTTATTTTCCACCCAGGTTTCAGT
ACTGCAAAAGCAGTCACACAGATTTCTGGTCGTGGTGTCGGACTGGATGTCGTACAAAGTGAAATTAAAGCGCTTGGTGG
TCATGTCTCAATTCAATCTACACTCGGTAAGGGTACAACCTTTACCATTCGCGTACCGACAACGGTAGCGGTAAGTGATG
CATTGATGGTGAAAGTTGGCGATCAACAATTCGCAATTGCCTTGGCGCAAATTGATCGAATTGTACGTATTGCACCTGCA
ACACTTGAGACTTATTTCAACAGTAAAGAAGACTACTTCAAGATTGATGGCACGGACTACAAGCTACGTTATCTCTCTGA
GTTTGTTGCTAATCAACCAATTCCACGCCTTAACAATGTTGGTCACTCGTTACCTGTGTTGTTAATTAAAGGGAACAGTG
GACAGACCATTGCGCTTCTTGTCGATCAATTAGTCGGTTCACGTTCACAGATCGTGGTGAAACCGATTGGTCAACAGTTT
GCCAATGTCGGTGTTGTCGCAGGGGCAACGATTCTCGGGGATGGTCAAGTGTGTCTGATTCTTGATGGTCAAAATGTTGC
ACGTCAAATTCAGGCAACACAACGTATTAAACATACGACTGAACATCGCGATATCCGAACAAGTAGCACACGCCGCTTAG
TCATGATTGTCGATGATTCTGTGACCGTACGTAAAGTGACATCGCGTTTACTTGAACGTCAGGGCTATGACATCGTGACT
GCGAAAGATGGTGTTGATGCGATGGAGCAACTTGAAAACGTACGCCCTGACTTAATGTTGCTAGATATTGAAATGCCACG
TATGGATGGTTTTGAGGTGACGAACTTGGTACGTCGCCATGATATTCATCGTGACTTACCAATTATTATGATTACCTCAC
GTACAGGCGAGAAACATCGTGAACGTGCATTCAGTTTAGGTGTGACTCACTACATGGGTAAACCATTCCAGGAAGCAGAA
TTGCTTGCCAATATCCAAGATTTGATTGCTGAAAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

58.616

100

0.596


Multiple sequence alignment