Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG/mmsA   Type   Machinery gene
Locus tag   BWR56_RS07170 Genome accession   NZ_CP019562
Coordinates   1492941..1494956 (-) Length   671 a.a.
NCBI ID   WP_076984737.1    Uniprot ID   -
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1487941..1499956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS07155 (BWR56_1419) - 1491489..1492469 (-) 981 WP_076984736.1 acetylxylan esterase -
  BWR56_RS07170 (BWR56_1421) recG/mmsA 1492941..1494956 (-) 2016 WP_076984737.1 ATP-dependent DNA helicase RecG Machinery gene
  BWR56_RS07175 (BWR56_1422) alr 1494975..1496078 (-) 1104 WP_076984738.1 alanine racemase -
  BWR56_RS07180 (BWR56_1423) acpS 1496068..1496430 (-) 363 WP_049520474.1 holo-ACP synthase -
  BWR56_RS07185 (BWR56_1424) - 1496475..1497506 (-) 1032 WP_071851258.1 3-deoxy-7-phosphoheptulonate synthase -
  BWR56_RS07190 (BWR56_1425) - 1497508..1498539 (-) 1032 WP_000231307.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence


Protein


Download         Length: 671 a.a.        Molecular weight: 75317.75 Da        Isoelectric Point: 5.6977

>NTDB_id=180967 BWR56_RS07170 WP_076984737.1 1492941..1494956(-) (recG/mmsA) [Streptococcus oralis strain S.MIT/ORALIS-351]
MNLHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTPASVQYYGFKRNRLR
FSLKQGEVVFAVNFFNQPYLADKIELGATLAVFGKWDRAKASLTGMKVLAQVEDDLQPVYRLAQGISQASLVKVIKTAFD
QGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEYKQALRRIKFEELFYFQMQLQSLKSENRVQGSGLVLNWSQE
KVTAVKESLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTSGYQAALMVPTEILAEQHFES
LQNLFPDLKLALLTGSLKAVEKREVLETIAKGEADFIIGTHALIQDGVDYARLGLIIIDEQHRFGVGQRRILREKGDNPD
VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIKHEQLPQVLTWLEGEIQKGSQAYVISPLIEESEALDLKN
AIALSEELTAHFAGKAEVALLHGKMKSDEKDQIMQDFKERKTDILVSTTVIEVGVNVPNATVMIIMDADRFGLSQLHQLR
GRVGRGDQQSYAVLVANPKTDSGKDRMRIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGLPEFQVADIIEDFPILEEARK
VASYISSIEGWQEDPEWRMIAFHLEKKEHLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=180967 BWR56_RS07170 WP_076984737.1 1492941..1494956(-) (recG/mmsA) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGAATCTACATCAACCCTTGCATGTCTTACCTGGTGTGGGACCAAAGTCAGCAGAGAAATACGCCAAACTAGGAATTGA
AAACTTGCAAGACCTCTTGCTCTACTTTCCTTTCCGTTATGAAGACTTCAAAACCAAGCAAGTATTGGAACTAGAGGACG
GGGAGAAGGCAGTCCTATCTGGTCAAGTCGTGACTCCTGCCAGTGTCCAGTATTATGGATTCAAGCGCAATCGTCTGCGC
TTTAGCCTCAAGCAGGGAGAAGTCGTTTTTGCGGTGAATTTCTTTAACCAGCCCTATCTAGCAGATAAGATAGAGTTGGG
AGCAACCCTTGCTGTCTTTGGAAAATGGGACCGTGCCAAGGCCAGTTTGACTGGGATGAAGGTTCTAGCTCAAGTGGAAG
ATGACCTCCAACCGGTTTATCGTCTGGCTCAAGGAATCAGTCAGGCCAGTCTGGTCAAGGTCATTAAGACAGCCTTTGAT
CAGGGGTTGGACCTCTTGATAGAGGAAAATCTTCCCCAGTCTTTGCTTGACAAATATAAACTCATGTCCCGTTGTCAGGC
AGTTCGTGCCATGCATTTTCCAAAGGATTTGGCAGAATACAAGCAGGCCCTTCGTCGGATCAAATTTGAGGAACTCTTTT
ATTTTCAGATGCAGTTGCAGTCACTCAAGTCTGAAAATAGAGTTCAGGGAAGCGGTCTGGTTCTGAATTGGTCCCAGGAA
AAAGTGACAGCCGTTAAAGAAAGTCTTCCTTTTGCCCTGACCCAAGCTCAGGAAAAAAGTTTGCAGGAAATCTTGACCGA
CATGAAGTCGGACCATCACATGAATCGTCTCCTGCAAGGAGATGTGGGGAGCGGAAAAACGGTGGTTGCTGGTTTGGCCA
TGTTTGCGGCGGTGACGTCTGGCTATCAGGCAGCTCTCATGGTGCCAACAGAAATCCTAGCAGAGCAACACTTTGAGAGT
TTACAGAACCTTTTTCCAGACTTGAAACTCGCTCTCTTGACAGGTTCCTTAAAAGCTGTAGAAAAAAGAGAAGTTTTAGA
GACCATTGCCAAGGGTGAGGCCGACTTTATTATCGGAACCCATGCTCTGATTCAGGATGGGGTAGATTATGCTCGTCTTG
GTTTGATTATCATTGATGAGCAGCACCGTTTTGGTGTGGGCCAAAGGCGTATTTTACGGGAAAAAGGGGACAATCCTGAC
GTCCTCATGATGACAGCAACGCCTATTCCACGGACGCTTGCTATCACAGCCTTTGGAGATATGGATGTTTCTATTATTGA
CCAGATGCCAGCAGGGCGGAAGCCTATTGTTACTCGCTGGATTAAGCATGAGCAGTTGCCTCAGGTCTTGACTTGGTTAG
AGGGGGAAATTCAAAAAGGTTCTCAAGCCTATGTTATCTCTCCCTTGATTGAGGAATCTGAAGCTCTGGATCTGAAAAAT
GCCATTGCCTTATCTGAGGAGTTGACAGCTCATTTTGCTGGTAAGGCTGAAGTGGCTCTTTTACATGGTAAAATGAAAAG
TGATGAAAAAGACCAAATCATGCAGGATTTCAAAGAGCGAAAAACGGATATTCTGGTTTCGACAACGGTTATTGAGGTTG
GGGTTAATGTTCCCAATGCGACCGTCATGATTATCATGGATGCCGACCGGTTCGGTCTCAGTCAGCTTCACCAGCTCAGA
GGCCGTGTTGGTCGGGGGGACCAGCAGTCCTATGCTGTTCTCGTTGCTAATCCCAAGACGGATTCTGGGAAAGATCGCAT
GCGCATCATGACAGAAACGACCAATGGATTTGTCCTTGCGGAGGAAGATTTGAAAATGCGTGGTTCTGGTGAGATTTTTG
GAACCAGACAGTCAGGACTTCCAGAGTTTCAAGTGGCTGATATTATCGAAGATTTTCCAATTTTAGAAGAAGCCAGAAAA
GTGGCTAGCTACATTAGTTCGATAGAAGGCTGGCAAGAGGATCCAGAGTGGCGCATGATTGCTTTCCATCTAGAAAAGAA
AGAACATCTAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

98.063

100

0.981

  recG/mmsA Streptococcus pneumoniae R36A

98.063

100

0.981

  recG Bacillus subtilis subsp. subtilis str. 168

49.263

100

0.498

  recG Neisseria meningitidis strain C311

38.724

100

0.389