Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   BZY74_RS05700 Genome accession   NZ_CP019558
Coordinates   1067149..1067781 (+) Length   210 a.a.
NCBI ID   WP_000242755.1    Uniprot ID   A0A1C4FZU4
Organism   Escherichia coli strain KSC207     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1062149..1072781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZY74_RS05670 (BZY74_05770) yheS 1062318..1064231 (+) 1914 WP_000634793.1 ABC transporter ATP-binding protein -
  BZY74_RS05675 (BZY74_05775) yheT 1064231..1065253 (+) 1023 WP_000057356.1 hydrolase -
  BZY74_RS05680 (BZY74_05780) yheU 1065247..1065465 (+) 219 WP_000907085.1 YheU family protein -
  BZY74_RS05685 (BZY74_05785) prkB 1065519..1066388 (+) 870 WP_001274680.1 phosphoribulokinase -
  BZY74_RS05690 (BZY74_05790) yhfA 1066443..1066847 (-) 405 WP_001148908.1 OsmC family protein -
  BZY74_RS05700 (BZY74_05800) crp 1067149..1067781 (+) 633 WP_000242755.1 cAMP-activated global transcriptional regulator CRP Regulator
  BZY74_RS05705 (BZY74_05805) yhfK 1067832..1069922 (+) 2091 WP_001345983.1 YccS/YhfK family putative transporter -
  BZY74_RS05710 (BZY74_05810) argD 1069989..1071209 (-) 1221 WP_000963785.1 bifunctional acetylornithine/succinyldiaminopimelate transaminase -
  BZY74_RS05715 (BZY74_05815) pabA 1071295..1071858 (-) 564 WP_000601844.1 aminodeoxychorismate synthase component 2 -
  BZY74_RS05720 (BZY74_05820) fic 1071890..1072492 (-) 603 WP_001280624.1 putative adenosine monophosphate-protein transferase Fic -
  BZY74_RS05725 (BZY74_05825) yhfG 1072482..1072649 (-) 168 WP_000736860.1 YhfG family protein -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23640.43 Da        Isoelectric Point: 8.2710

>NTDB_id=180754 BZY74_RS05700 WP_000242755.1 1067149..1067781(+) (crp) [Escherichia coli strain KSC207]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG
QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR

Nucleotide


Download         Length: 633 bp        

>NTDB_id=180754 BZY74_RS05700 WP_000242755.1 1067149..1067781(+) (crp) [Escherichia coli strain KSC207]
ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAA
GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAG
ACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC
CAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAT
TCAGGTAAACCCGGACATTCTGATGCGTCTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCA
ACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAACCTGGCAAAACAACCAGATGCTATGACTCAC
CCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATCGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAT
TCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA

Domains

Predicted by InterProScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(23-109)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(142-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C4FZU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Vibrio cholerae strain A1552

95.714

100

0.957
  crp Haemophilus influenzae Rd KW20

77.941

97.143

0.757
  crp Acinetobacter baumannii D1279779

47.343

98.571

0.467