Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A7E59_RS06725 | Genome accession | NZ_CP015552 |
| Coordinates | 1374410..1374835 (+) | Length | 141 a.a. |
| NCBI ID | WP_235318543.1 | Uniprot ID | - |
| Organism | Staphylococcus carnosus strain TMW 2.1538 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1369410..1379835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7E59_RS06695 (A7E59_06550) | - | 1370201..1370743 (+) | 543 | WP_046099267.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| A7E59_RS06700 (A7E59_06555) | - | 1370760..1372220 (+) | 1461 | WP_046099268.1 | rhomboid family intramembrane serine protease | - |
| A7E59_RS06705 (A7E59_06560) | - | 1372201..1372401 (+) | 201 | WP_015900419.1 | YqgQ family protein | - |
| A7E59_RS06710 (A7E59_06565) | - | 1372401..1373387 (+) | 987 | WP_046099269.1 | ROK family glucokinase | - |
| A7E59_RS06715 (A7E59_06570) | - | 1373387..1373716 (+) | 330 | WP_015900417.1 | MTH1187 family thiamine-binding protein | - |
| A7E59_RS06720 (A7E59_06575) | - | 1373716..1374339 (+) | 624 | WP_015900416.1 | MBL fold metallo-hydrolase | - |
| A7E59_RS06725 (A7E59_06580) | comGA | 1374410..1374835 (+) | 426 | WP_235318543.1 | ATPase, T2SS/T4P/T4SS family | Machinery gene |
| A7E59_RS06730 | - | 1375300..1375674 (+) | 375 | WP_200894317.1 | helix-turn-helix domain-containing protein | - |
| A7E59_RS06735 | - | 1375644..1376465 (+) | 822 | WP_200894318.1 | DNA adenine methylase | - |
| A7E59_RS06740 | - | 1376417..1377403 (+) | 987 | WP_200894319.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| A7E59_RS06745 (A7E59_06590) | - | 1377409..1379364 (+) | 1956 | WP_046099270.1 | AlwI family type II restriction endonuclease | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 16402.09 Da Isoelectric Point: 8.7804
>NTDB_id=180604 A7E59_RS06725 WP_235318543.1 1374410..1374835(+) (comGA) [Staphylococcus carnosus strain TMW 2.1538]
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYLKLLTFMKFQAVLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGVL
MKRLLDTILTDAISKNVSDIHFIPIEKEVIIKFRIHDDLINYDNIEILTYLKLLTFMKFQAVLDVSNYHQAQSGQTTFKH
QKLYNLRVSTLPLSLGIESCVIRLSPQYFYQDTDRDGPKHFYHLMNKKQGLILFTGPTGVL
Nucleotide
Download Length: 426 bp
>NTDB_id=180604 A7E59_RS06725 WP_235318543.1 1374410..1374835(+) (comGA) [Staphylococcus carnosus strain TMW 2.1538]
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTTAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGTGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGGGTATTATGA
ATGAAAAGACTTTTAGATACAATTCTCACAGATGCAATTTCGAAAAATGTATCTGATATCCATTTTATTCCAATTGAAAA
AGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGACTTATTTAAAGTTAC
TTACGTTTATGAAATTTCAAGCAGTGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGACAACTTTCAAGCAT
CAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATACGACTTTCACCCCA
GTATTTTTATCAAGATACCGATCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCAAGGACTTATTTTAT
TCACGGGACCAACCGGGGTATTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
56.115 |
98.582 |
0.553 |
| comGA | Staphylococcus aureus N315 |
56.115 |
98.582 |
0.553 |
| pilB | Glaesserella parasuis strain SC1401 |
36.735 |
100 |
0.383 |