Detailed information NTG0180054

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: A4W74_RS06030
• Genome accession: NZ_CP015494
• Coordinates: 1180226..1181128 (-)
• Length: 300 a.a.
• NCBI ID: WP_054644305.1
• Uniprot ID: -
• Organism: Latilactobacillus curvatus strain TMW 1.1390
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1175226..1186128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W74_RS06005 (A4W74_05975)	-	1175394..1176338 (-)	945	WP_253733397.1	hypothetical protein	-
A4W74_RS06010 (A4W74_05980)	-	1176421..1178139 (-)	1719	WP_253733398.1	ribonuclease J	-
A4W74_RS06015 (A4W74_05985)	rpsO	1178342..1178611 (-)	270	WP_004271112.1	30S ribosomal protein S15	-
A4W74_RS06020 (A4W74_05990)	rpsT	1178888..1179142 (+)	255	WP_004271117.1	30S ribosomal protein S20	-
A4W74_RS06025 (A4W74_05995)	holA	1179197..1180225 (-)	1029	WP_253733399.1	DNA polymerase III subunit delta	-
A4W74_RS06030	comEC	1180226..1181128 (-)	903	WP_054644305.1	MBL fold metallo-hydrolase	Machinery gene
A4W74_RS06035	-	1181177..1182339 (-)	1163	Protein_1176	ComEC/Rec2 family competence protein	-
A4W74_RS06040 (A4W74_06005)	-	1182480..1182968 (-)	489	WP_111447701.1	ComE operon protein 2	-
A4W74_RS06045 (A4W74_06010)	comEA	1183027..1183698 (-)	672	WP_253733400.1	helix-hairpin-helix domain-containing protein	Machinery gene
A4W74_RS06050 (A4W74_06015)	-	1183775..1184821 (-)	1047	WP_080563410.1	SepM family pheromone-processing serine protease	-
A4W74_RS06055 (A4W74_06020)	coaD	1184823..1185317 (-)	495	WP_065825725.1	pantetheine-phosphate adenylyltransferase	-
A4W74_RS06060 (A4W74_06025)	rsmD	1185329..1185883 (-)	555	WP_065825726.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-

Sequence

Protein

• Length: 300 a.a.
• Molecular weight: 33419.31 Da
• Isoelectric Point: 9.3338

>NTDB_id=180054 A4W74_RS06030 WP_054644305.1 1180226..1181128(-) (comEC) [Latilactobacillus curvatus strain TMW 1.1390]
MASTGRRAKWGWGAVISLYVISFIGIHFNPVGRVIMFDIGQGDSLLIQQPFNRHNLLIDTGGRLALPQEKWQRRQIVSRA
EKVTVNYLYSCGIDHLEAIALSHQDADHIGDLNEIMQHIRVKRLICAAGLPQNRQFQRQVRPHLTKVAIEPYLADQHFMI
GHQQINVLAPVVAGPGGNADSLVLQTQIGGASWLFTGDLEKAGEVAIVDRYPQLRVDYLKVGHHGSQTASDPQSIATWQV
KGALISAGRHNRYGHPHAATLQTLKRANVPFWNTADCGMLEWRYGFGQVPMIKTTLKDCD

Nucleotide

• Length: 903 bp

>NTDB_id=180054 A4W74_RS06030 WP_054644305.1 1180226..1181128(-) (comEC) [Latilactobacillus curvatus strain TMW 1.1390]
ATGGCAAGTACTGGTCGGCGAGCAAAGTGGGGCTGGGGGGCTGTTATCAGCCTGTATGTCATTAGTTTTATTGGTATCCA
CTTTAATCCGGTTGGCCGCGTGATTATGTTTGATATCGGGCAAGGCGATAGCCTGTTGATTCAACAACCCTTCAATCGAC
ATAACCTGTTAATTGACACCGGCGGCCGACTAGCTTTACCGCAAGAAAAGTGGCAACGGCGGCAAATTGTGAGTCGGGCG
GAAAAAGTAACAGTTAATTACCTCTACAGCTGTGGCATTGATCATTTAGAGGCAATCGCATTATCGCATCAGGATGCTGA
TCATATAGGGGACTTAAATGAAATTATGCAACATATCCGAGTTAAACGGTTGATTTGTGCTGCGGGCTTACCGCAAAACC
GGCAGTTTCAACGGCAAGTGCGGCCGCATCTTACAAAAGTTGCAATTGAACCTTATTTGGCGGACCAACATTTTATGATT
GGTCACCAACAAATCAATGTGTTAGCGCCAGTGGTGGCCGGACCAGGCGGGAATGCTGACTCACTCGTTTTGCAAACGCA
AATTGGTGGTGCGAGTTGGTTATTTACTGGTGATTTAGAAAAAGCGGGTGAAGTGGCAATCGTTGATCGCTACCCACAAT
TACGCGTTGATTACCTAAAGGTGGGTCACCATGGCAGTCAAACGGCGAGTGATCCCCAGTCAATTGCGACGTGGCAGGTA
AAAGGGGCGTTGATTTCTGCGGGACGCCATAATCGTTATGGTCATCCACATGCCGCAACGTTGCAGACTTTAAAACGTGC
GAACGTCCCATTTTGGAATACGGCTGACTGTGGGATGCTGGAATGGCGCTATGGTTTTGGCCAAGTGCCAATGATTAAAA
CAACACTAAAGGATTGTGACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (40-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Latilactobacillus sakei subsp. sakei 23K	71.08	95.667	0.68