Detailed information NTG0179965

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: BWQ98_RS09535
• Genome accession: NZ_CP019299
• Coordinates: 1766308..1767207 (-)
• Length: 299 a.a.
• NCBI ID: WP_050115346.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain HKU1-14
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1761308..1772207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BWQ98_RS09510 (BWQ98_09525)	rsmA	1761642..1762514 (-)	873	WP_001216863.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
BWQ98_RS09515 (BWQ98_09530)	-	1762645..1762953 (-)	309	WP_000333257.1	hypothetical protein	-
BWQ98_RS09520 (BWQ98_09535)	-	1762946..1763587 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
BWQ98_RS09525 (BWQ98_09540)	-	1763589..1765619 (-)	2031	WP_000825268.1	bacteriocin-associated integral membrane family protein	-
BWQ98_RS09530 (BWQ98_09545)	-	1765696..1765988 (-)	293	Protein_1783	lactococcin 972 family bacteriocin	-
BWQ98_RS09535 (BWQ98_09550)	comR	1766308..1767207 (-)	900	WP_050115346.1	helix-turn-helix transcriptional regulator	Regulator
BWQ98_RS09540 (BWQ98_09555)	rnmV	1767279..1767839 (-)	561	WP_000660009.1	ribonuclease M5	-
BWQ98_RS09545 (BWQ98_09560)	-	1767839..1768612 (-)	774	WP_000575633.1	TatD family hydrolase	-
BWQ98_RS09555 (BWQ98_09570)	-	1768917..1769816 (-)	900	WP_050243368.1	DUF1542 domain-containing protein	-
BWQ98_RS09560 (BWQ98_09575)	rpmH	1770095..1770229 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
BWQ98_RS09565 (BWQ98_09580)	-	1770637..1771590 (+)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35298.10 Da
• Isoelectric Point: 4.8932

>NTDB_id=179965 BWQ98_RS09535 WP_050115346.1 1766308..1767207(-) (comR) [Streptococcus pneumoniae strain HKU1-14]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIAHRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=179965 BWQ98_RS09535 WP_050115346.1 1766308..1767207(-) (comR) [Streptococcus pneumoniae strain HKU1-14]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCACC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus mutans UA159	37.415	98.328	0.368
comR	Streptococcus suis D9	36.12	100	0.361