Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | A1D33_RS16760 | Genome accession | NZ_CP015443 |
| Coordinates | 3528686..3528952 (+) | Length | 88 a.a. |
| NCBI ID | WP_050515801.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain CC09 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3523686..3533952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D33_RS16740 (A1D33_016735) | - | 3523955..3525256 (-) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| A1D33_RS16745 (A1D33_016740) | - | 3525402..3526352 (+) | 951 | WP_015417820.1 | magnesium transporter CorA family protein | - |
| A1D33_RS16750 (A1D33_016745) | comGA | 3526545..3527615 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A1D33_RS16755 (A1D33_016750) | comGB | 3527602..3528639 (+) | 1038 | WP_015417819.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A1D33_RS16760 (A1D33_016755) | comGC | 3528686..3528952 (+) | 267 | WP_050515801.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A1D33_RS16765 (A1D33_016760) | comGD | 3528942..3529379 (+) | 438 | WP_015417817.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| A1D33_RS16770 (A1D33_016765) | comGE | 3529363..3529677 (+) | 315 | WP_012117982.1 | competence type IV pilus minor pilin ComGE | - |
| A1D33_RS16775 (A1D33_016770) | comGF | 3529586..3530086 (+) | 501 | WP_257738552.1 | competence type IV pilus minor pilin ComGF | - |
| A1D33_RS16780 (A1D33_016775) | comGG | 3530087..3530464 (+) | 378 | WP_015417814.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| A1D33_RS16785 (A1D33_016780) | - | 3530521..3530700 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| A1D33_RS16790 (A1D33_016785) | - | 3530740..3531069 (-) | 330 | WP_039254490.1 | DUF3889 domain-containing protein | - |
| A1D33_RS16795 (A1D33_016790) | tapA | 3531328..3531999 (+) | 672 | WP_031378945.1 | amyloid fiber anchoring/assembly protein TapA | - |
| A1D33_RS16800 (A1D33_016795) | sipW | 3531971..3532555 (+) | 585 | WP_015240205.1 | signal peptidase I SipW | - |
| A1D33_RS16805 (A1D33_016800) | tasA | 3532620..3533405 (+) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| A1D33_RS16810 (A1D33_016805) | sinR | 3533453..3533788 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9749.37 Da Isoelectric Point: 6.2027
>NTDB_id=179880 A1D33_RS16760 WP_050515801.1 3528686..3528952(+) (comGC) [Bacillus velezensis strain CC09]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTVCPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTVCPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=179880 A1D33_RS16760 WP_050515801.1 3528686..3528952(+) (comGC) [Bacillus velezensis strain CC09]
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGTCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGTCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
76.056 |
80.682 |
0.614 |