Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NX99_RS07605 | Genome accession | NZ_CP015282 |
| Coordinates | 1657870..1658826 (+) | Length | 318 a.a. |
| NCBI ID | WP_002885753.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain ATCC 27945 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1652870..1663826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX99_RS07565 (NX99_07425) | - | 1653768..1654130 (+) | 363 | WP_002887019.1 | DUF1033 family protein | - |
| NX99_RS07570 (NX99_07430) | comGA/cglA/cilD | 1654210..1655151 (+) | 942 | WP_002887018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NX99_RS07575 (NX99_07435) | comYB | 1655033..1656133 (+) | 1101 | WP_148263031.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NX99_RS07580 (NX99_07440) | comYC | 1656142..1656456 (+) | 315 | WP_037611125.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NX99_RS07585 (NX99_07445) | comYD | 1656416..1656844 (+) | 429 | WP_253183813.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NX99_RS07590 (NX99_07450) | comGE | 1656876..1657106 (+) | 231 | WP_021144685.1 | competence type IV pilus minor pilin ComGE | - |
| NX99_RS07595 (NX99_07455) | comYF | 1657093..1657530 (+) | 438 | WP_021144684.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NX99_RS07600 (NX99_07460) | comGG | 1657508..1657825 (+) | 318 | WP_021144683.1 | competence type IV pilus minor pilin ComGG | - |
| NX99_RS07605 (NX99_07465) | comYH | 1657870..1658826 (+) | 957 | WP_002885753.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NX99_RS07610 (NX99_07470) | - | 1658883..1660076 (+) | 1194 | WP_002885831.1 | acetate kinase | - |
| NX99_RS07615 (NX99_07475) | - | 1660327..1660524 (+) | 198 | WP_002885716.1 | helix-turn-helix transcriptional regulator | - |
| NX99_RS07620 (NX99_07480) | - | 1660536..1661192 (+) | 657 | WP_084915247.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NX99_RS07625 (NX99_07485) | - | 1661272..1661718 (+) | 447 | WP_084915249.1 | CAAX protease | - |
| NX99_RS07630 (NX99_07490) | - | 1661831..1662493 (+) | 663 | WP_002885821.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NX99_RS07635 (NX99_07495) | proC | 1662524..1663294 (-) | 771 | WP_013991257.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35775.66 Da Isoelectric Point: 4.3482
>NTDB_id=178238 NX99_RS07605 WP_002885753.1 1657870..1658826(+) (comYH) [Streptococcus salivarius strain ATCC 27945]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALDLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEVLKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALDLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKDDQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEVLKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=178238 NX99_RS07605 WP_002885753.1 1657870..1658826(+) (comYH) [Streptococcus salivarius strain ATCC 27945]
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCGCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCCCTTGATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATTAAACTAGGGCAATTG
GAAGCCTTACAAGCCAATCACCAATTTACACCGGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATATTTTGGAGATTGGTTCGGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGCATTGCTGATGTGGTGAATTCAAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACACATTCTCAAAGAGAGTGATGTTATTATCAGTGATCTACCTGTTGG
TTATTACCCAAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACCGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACCTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGATTTGCTTAAGAAATGGCTATCAGGATATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTTGTTTATCCACTTAGTG
ATTTGCAAAACCCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCGCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AGAAATTACGTGCCCTTGATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTCTTGTTTATTAAACTAGGGCAATTG
GAAGCCTTACAAGCCAATCACCAATTTACACCGGATGCTATTGGATTTATCATTCTTTACCTACTTGAAGGTTTGACCAA
GGACGACCAATTAGATATTTTGGAGATTGGTTCGGGGACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGCATTGCTGATGTGGTGAATTCAAGT
GCAGTTTACATCCAAGAAGATGCTGTTCGACCACACATTCTCAAAGAGAGTGATGTTATTATCAGTGATCTACCTGTTGG
TTATTACCCAAATGATGAGATTGCGAGTCGTTTCAAGGTTGCAGCAACCGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACCTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGATTTGCTTAAGAAATGGCTATCAGGATATGCTGATATTATTGCCGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTTGTTTATCCACTTAGTG
ATTTGCAAAACCCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
70.476 |
99.057 |
0.698 |
| comYH | Streptococcus mutans UA140 |
70.476 |
99.057 |
0.698 |