Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   NX99_RS03840 Genome accession   NZ_CP015282
Coordinates   919126..920127 (-) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus salivarius strain ATCC 27945     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 914126..925127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS03820 (NX99_03765) eno 914865..916169 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  NX99_RS03825 (NX99_03770) - 916376..916831 (+) 456 WP_002885945.1 YueI family protein -
  NX99_RS03830 (NX99_03775) - 916871..917986 (-) 1116 WP_084914814.1 glycerate kinase -
  NX99_RS03835 (NX99_03780) - 917999..919066 (-) 1068 WP_084914816.1 MmcQ/YjbR family DNA-binding protein -
  NX99_RS03840 (NX99_03785) ccpA 919126..920127 (-) 1002 WP_014634136.1 catabolite control protein A Regulator
  NX99_RS03845 (NX99_03790) - 920441..921523 (+) 1083 WP_073687532.1 M24 family metallopeptidase -
  NX99_RS03850 (NX99_03795) - 921623..921991 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  NX99_RS03855 (NX99_03800) - 921993..923399 (-) 1407 WP_084914818.1 Cof-type HAD-IIB family hydrolase -
  NX99_RS03860 (NX99_03805) smpB 923546..924010 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=178205 NX99_RS03840 WP_014634136.1 919126..920127(-) (ccpA) [Streptococcus salivarius strain ATCC 27945]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=178205 NX99_RS03840 WP_014634136.1 919126..920127(-) (ccpA) [Streptococcus salivarius strain ATCC 27945]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACTACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACCATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCGAAACAGGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATCCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTCTTAGCAGGAACAGTGGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAAGATTCTGTAACGCAGCTTGCTAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGACGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCCGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAATTCTGGT
GCCACTGCTGCTTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGTCTCTTTGCAGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment