Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IEC338SC_RS17780 Genome accession   NZ_CP015145
Coordinates   3729513..3729896 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain IEC338SC     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3724513..3734896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IEC338SC_RS17765 (IEC338SC_3581) - 3726406..3728487 (-) 2082 WP_063099553.1 methyl-accepting chemotaxis protein -
  IEC338SC_RS17770 (IEC338SC_3582) pilI 3728534..3729070 (-) 537 WP_063099554.1 chemotaxis protein CheW -
  IEC338SC_RS17775 (IEC338SC_3583) pilH 3729127..3729489 (-) 363 WP_046811934.1 response regulator -
  IEC338SC_RS17780 (IEC338SC_3584) pilG 3729513..3729896 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IEC338SC_RS17785 (IEC338SC_3585) - 3730181..3730819 (+) 639 WP_044100316.1 hypothetical protein -
  IEC338SC_RS17790 (IEC338SC_3586) nolF 3730888..3731997 (+) 1110 WP_082188660.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=177117 IEC338SC_RS17780 WP_000389061.1 3729513..3729896(-) (pilG) [Acinetobacter pittii strain IEC338SC]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=177117 IEC338SC_RS17780 WP_000389061.1 3729513..3729896(-) (pilG) [Acinetobacter pittii strain IEC338SC]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment