Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | IEC338SC_RS05225 | Genome accession | NZ_CP015145 |
| Coordinates | 1099691..1100095 (+) | Length | 134 a.a. |
| NCBI ID | WP_063098124.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain IEC338SC | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1094691..1105095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEC338SC_RS05200 (IEC338SC_1046) | lpoB | 1095108..1095710 (-) | 603 | WP_063098120.1 | penicillin-binding protein activator LpoB | - |
| IEC338SC_RS05205 (IEC338SC_1047) | - | 1095764..1096174 (-) | 411 | WP_063098121.1 | YcfL family protein | - |
| IEC338SC_RS05210 (IEC338SC_1048) | - | 1096194..1097507 (-) | 1314 | WP_063099670.1 | COG3014 family protein | - |
| IEC338SC_RS05215 (IEC338SC_1049) | - | 1098030..1098803 (-) | 774 | WP_063098122.1 | SDR family oxidoreductase | - |
| IEC338SC_RS05220 (IEC338SC_1050) | mazG | 1098916..1099722 (+) | 807 | WP_063098123.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| IEC338SC_RS05225 (IEC338SC_1051) | comEA | 1099691..1100095 (+) | 405 | WP_063098124.1 | ComEA family DNA-binding protein | Machinery gene |
| IEC338SC_RS05230 (IEC338SC_1052) | pcnB | 1100221..1101684 (+) | 1464 | WP_002117192.1 | polynucleotide adenylyltransferase PcnB | - |
| IEC338SC_RS05235 (IEC338SC_1053) | folK | 1101681..1102163 (+) | 483 | WP_014208398.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| IEC338SC_RS05240 (IEC338SC_1054) | panB | 1102209..1103018 (+) | 810 | WP_063098125.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| IEC338SC_RS05245 (IEC338SC_1055) | panC | 1103022..1103870 (+) | 849 | WP_063098126.1 | pantoate--beta-alanine ligase | - |
| IEC338SC_RS05250 (IEC338SC_1056) | rapZ | 1103894..1104745 (+) | 852 | WP_063098127.1 | RNase adapter RapZ | - |
| IEC338SC_RS05255 (IEC338SC_1057) | - | 1104742..1105011 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15521.85 Da Isoelectric Point: 10.6823
>NTDB_id=177104 IEC338SC_RS05225 WP_063098124.1 1099691..1100095(+) (comEA) [Acinetobacter pittii strain IEC338SC]
MQFSMNLWKNKHNIFIILFWSLISSTLVQAQSFDQNFKEWKAKQQRYDQKLSMQRSAHSNSPKSSVMTDSSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKMRLTL
MQFSMNLWKNKHNIFIILFWSLISSTLVQAQSFDQNFKEWKAKQQRYDQKLSMQRSAHSNSPKSSVMTDSSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKMRLTL
Nucleotide
Download Length: 405 bp
>NTDB_id=177104 IEC338SC_RS05225 WP_063098124.1 1099691..1100095(+) (comEA) [Acinetobacter pittii strain IEC338SC]
ATGCAGTTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCGACGCT
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCGCTCCGCTCATTCTAATAGCCCAAAAAGTTCAGTTATGACTGATTCGTCAGGGCAAATTCACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAATGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAATGCGTTTGACTT
TATAA
ATGCAGTTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCGACGCT
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCGCTCCGCTCATTCTAATAGCCCAAAAAGTTCAGTTATGACTGATTCGTCAGGGCAAATTCACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAATGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAATGCGTTTGACTT
TATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii strain A118 |
68.613 |
100 |
0.701 |
| comEA | Acinetobacter baumannii D1279779 |
68.613 |
100 |
0.701 |
| comEA | Acinetobacter baylyi ADP1 |
43.548 |
92.537 |
0.403 |